Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.45□□□□□ -2.02
NEDD4P46934 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.45□□□□□ -2.02
NEDD4P46934 AL360271.2-201ENST00000447710 161 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 ZNF519P1-201ENST00000449011 1626 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 RPS15AP27-201ENST00000449183 343 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD4P46934 AL583843.1-201ENST00000456070 346 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 ADAM3A-203ENST00000461344 2157 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 AC079804.2-201ENST00000490376 200 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 AC113155.1-201ENST00000511141 769 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD4P46934 RNU6-1178P-201ENST00000516674 107 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD4P46934 AL157687.1-201ENST00000554853 619 ntBASIC2.45□□□□□ -2.02
NEDD4P46934 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.45□□□□□ -2.02
NEDD4P46934 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD4P46934 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NEDD4P46934 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD4P46934 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NEDD4P46934 MIRLET7G-201ENST00000362280 84 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 Y_RNA.9-201ENST00000362354 101 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 RNU6-715P-201ENST00000365204 103 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 Z98749.2-208ENST00000381646 500 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 SNORA69-201ENST00000383895 132 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 SNORA75B-201ENST00000384053 137 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 RNU6-393P-201ENST00000384475 107 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 HMGB3P2-201ENST00000411913 584 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.44□□□□□ -2.02
NEDD4P46934 MTCYBP8-201ENST00000422855 651 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.44□□□□□ -2.02
NEDD4P46934 AC009414.1-201ENST00000427200 443 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.44□□□□□ -2.02
NEDD4P46934 USP9YP8-201ENST00000441913 500 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 AL031659.1-201ENST00000447075 539 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AL513124.1-201ENST00000450410 614 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 BTF3P15-201ENST00000455606 336 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.44□□□□□ -2.02
NEDD4P46934 RNU6-717P-201ENST00000459076 104 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.44□□□□□ -2.02
NEDD4P46934 YWHAEP4-201ENST00000505390 198 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC074344.1-201ENST00000512823 224 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 RNU6-835P-201ENST00000516974 104 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.44□□□□□ -2.02
NEDD4P46934 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.44□□□□□ -2.02
NEDD4P46934 OR5AQ1P-201ENST00000527596 927 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC006199.1-201ENST00000548728 219 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 HIF1AP1-201ENST00000553642 175 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 TPRKBP2-201ENST00000565969 475 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC007151.1-201ENST00000572774 483 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NEDD4P46934 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.44□□□□□ -2.02
NEDD4P46934 BNIP3P30-201ENST00000601184 574 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.44□□□□□ -2.02
NEDD4P46934 AC025165.5-201ENST00000602802 578 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AL162413.1-201ENST00000603198 110 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AL355877.2-201ENST00000603670 358 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AC093788.1-201ENST00000609356 927 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 Y_RNA.783-201ENST00000613546 102 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.44□□□□□ -2.02
NEDD4P46934 UCA1.1-201ENST00000620952 75 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 MIR1321-201ENST00000637766 79 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 CDC27P3-201ENST00000635418 1910 ntBASIC2.44□□□□□ -2.02
NEDD4P46934 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
NEDD4P46934 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
NEDD4P46934 RNA5SP432-201ENST00000362480 116 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 Y_RNA.399-201ENST00000383955 105 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 Y_RNA.505-201ENST00000384489 102 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 RNU2-49P-201ENST00000410666 184 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 RNU6-607P-201ENST00000411283 108 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.43□□□□□ -2.02
NEDD4P46934 AL669831.1-202ENST00000428504 417 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 AC000111.3-201ENST00000433478 193 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 GTF2IP13-201ENST00000438487 386 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.43□□□□□ -2.02
NEDD4P46934 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.43□□□□□ -2.02
NEDD4P46934 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.43□□□□□ -2.02
NEDD4P46934 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.43□□□□□ -2.02
NEDD4P46934 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.43□□□□□ -2.02
NEDD4P46934 SCARNA18-201ENST00000459004 134 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 RNU7-180P-201ENST00000459240 63 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.43□□□□□ -2.02
NEDD4P46934 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.43□□□□□ -2.02
NEDD4P46934 RNU6-1281P-201ENST00000516223 105 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 IGKV3-31-201ENST00000523109 329 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 MTND4P7-201ENST00000523876 130 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.43□□□□□ -2.02
NEDD4P46934 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.43□□□□□ -2.02
NEDD4P46934 AC008739.2-201ENST00000597006 317 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 AL021997.1-201ENST00000605757 193 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 RMST_4.1-201ENST00000616886 107 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NEDD4P46934 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
NEDD4P46934 AC010889.1-201ENST00000566193 2666 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms