Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.95□□□□□ -2.26
RPL28P46779 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.95□□□□□ -2.26
RPL28P46779 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPL28P46779 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.95□□□□□ -2.26
RPL28P46779 TRAV32-201ENST00000553993 340 ntBASIC0.95□□□□□ -2.26
RPL28P46779 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 SUB1P4-201ENST00000566062 339 ntBASIC0.95□□□□□ -2.26
RPL28P46779 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 SCARNA4-202ENST00000625402 129 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 AL161722.3-201ENST00000605789 2983 ntBASIC0.95□□□□□ -2.26
RPL28P46779 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPL28P46779 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RPL28P46779 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
RPL28P46779 RNU6-212P-201ENST00000362642 104 ntBASIC0.94□□□□□ -2.26
RPL28P46779 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL28P46779 RNU6-160P-201ENST00000384591 107 ntBASIC0.94□□□□□ -2.26
RPL28P46779 MIR10A-201ENST00000385043 110 ntBASIC0.94□□□□□ -2.26
RPL28P46779 MIR758-201ENST00000390227 88 ntBASIC0.94□□□□□ -2.26
RPL28P46779 MIR1289-2-201ENST00000408360 111 ntBASIC0.94□□□□□ -2.26
RPL28P46779 Y_RNA.597-201ENST00000410463 100 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL28P46779 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL28P46779 NCOR1P3-201ENST00000420479 303 ntBASIC0.94□□□□□ -2.26
RPL28P46779 MTCYBP5-201ENST00000423752 1135 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL28P46779 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.94□□□□□ -2.26
RPL28P46779 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL28P46779 RPL30P1-201ENST00000488676 339 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AC099513.1-201ENST00000490423 301 ntBASIC0.94□□□□□ -2.26
RPL28P46779 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.94□□□□□ -2.26
RPL28P46779 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.94□□□□□ -2.26
RPL28P46779 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL28P46779 RNU6-991P-201ENST00000516168 107 ntBASIC0.94□□□□□ -2.26
RPL28P46779 RNU2-10P-201ENST00000516375 211 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AC123904.2-201ENST00000548059 300 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL28P46779 AC137800.2-201ENST00000574375 120 ntBASIC0.94□□□□□ -2.26
RPL28P46779 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.94□□□□□ -2.26
RPL28P46779 MIR4307-201ENST00000582802 84 ntBASIC0.94□□□□□ -2.26
RPL28P46779 PRR13P7-201ENST00000605538 430 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.94□□□□□ -2.26
RPL28P46779 MIR7843-201ENST00000622274 79 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AC007792.1-201ENST00000623023 402 ntBASIC0.94□□□□□ -2.26
RPL28P46779 AC005858.4-201ENST00000623191 700 ntBASIC0.94□□□□□ -2.26
RPL28P46779 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.94□□□□□ -2.26
RPL28P46779 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.94□□□□□ -2.26
RPL28P46779 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
RPL28P46779 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.94□□□□□ -2.26
RPL28P46779 OR4G2P-201ENST00000328113 903 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AL353777.1-201ENST00000425552 326 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.93□□□□□ -2.26
RPL28P46779 MTND3P1-201ENST00000441336 220 ntBASIC0.93□□□□□ -2.26
RPL28P46779 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.93□□□□□ -2.26
RPL28P46779 AC245517.4-201ENST00000448601 281 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.93□□□□□ -2.26
RPL28P46779 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.93□□□□□ -2.26
RPL28P46779 snoU13.9-201ENST00000458927 103 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AC087477.1-201ENST00000465747 340 ntBASIC0.93□□□□□ -2.26
RPL28P46779 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.93□□□□□ -2.26
RPL28P46779 AC009646.1-201ENST00000510455 318 ntBASIC0.93□□□□□ -2.26
RPL28P46779 SNORA43.2-201ENST00000516652 128 ntBASIC0.93□□□□□ -2.26
RPL28P46779 RNU6-1003P-201ENST00000517099 105 ntBASIC0.93□□□□□ -2.26
RPL28P46779 RNU6-201P-201ENST00000517100 61 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AC087441.2-201ENST00000529141 262 ntBASIC0.93□□□□□ -2.26
RPL28P46779 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.93□□□□□ -2.26
RPL28P46779 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.93□□□□□ -2.26
RPL28P46779 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.93□□□□□ -2.26
RPL28P46779 SUB1P3-201ENST00000564581 315 ntBASIC0.93□□□□□ -2.26
RPL28P46779 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.93□□□□□ -2.26
RPL28P46779 AC022022.2-201ENST00000602989 360 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AC123912.5-201ENST00000605470 343 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AL590240.4-201ENST00000616908 390 ntBASIC0.93□□□□□ -2.26
RPL28P46779 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
RPL28P46779 AC008993.2-201ENST00000631744 806 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AC013437.2-201ENST00000639587 677 ntBASIC0.93□□□□□ -2.26
RPL28P46779 AC091812.1-201ENST00000432235 1948 ntBASIC0.93□□□□□ -2.26
RPL28P46779 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
RPL28P46779 SNORD114-6-201ENST00000364393 72 ntBASIC0.92□□□□□ -2.26
RPL28P46779 BTF3L4P1-201ENST00000413813 468 ntBASIC0.92□□□□□ -2.26
RPL28P46779 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.92□□□□□ -2.26
RPL28P46779 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AL669831.1-202ENST00000428504 417 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AL365400.1-201ENST00000431854 640 ntBASIC0.92□□□□□ -2.26
RPL28P46779 RPL23AP30-201ENST00000432419 501 ntBASIC0.92□□□□□ -2.26
RPL28P46779 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.92□□□□□ -2.26
RPL28P46779 SNRPGP13-201ENST00000442212 177 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.92□□□□□ -2.26
RPL28P46779 MTND2P4-201ENST00000445034 1004 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AC006026.2-201ENST00000457376 180 ntBASIC0.92□□□□□ -2.26
RPL28P46779 RNU6-333P-201ENST00000459117 107 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.92□□□□□ -2.26
RPL28P46779 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.92□□□□□ -2.26
RPL28P46779 RNA5SP445-201ENST00000515889 115 ntBASIC0.92□□□□□ -2.26
RPL28P46779 RN7SKP179-201ENST00000516126 217 ntBASIC0.92□□□□□ -2.26
RPL28P46779 Y_RNA.687-201ENST00000516558 91 ntBASIC0.92□□□□□ -2.26
RPL28P46779 RNU6-902P-201ENST00000517212 91 ntBASIC0.92□□□□□ -2.26
RPL28P46779 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms