Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.34□□□□□ -1.72
CHRNA4P43681 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CHRNA4P43681 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.34□□□□□ -1.72
CHRNA4P43681 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.34□□□□□ -1.72
CHRNA4P43681 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHRNA4P43681 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHRNA4P43681 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHRNA4P43681 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.33□□□□□ -1.72
CHRNA4P43681 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHRNA4P43681 RNU6-1167P-201ENST00000363227 94 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 RNY1P11-201ENST00000363759 113 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 SNORA36C-201ENST00000384289 132 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 MIR626-201ENST00000385032 94 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 MIR34A-201ENST00000385130 110 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 MIR23A-201ENST00000385245 73 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 RNA5SP56-201ENST00000410277 118 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 RPS29P17-201ENST00000430795 166 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 AC124916.1-201ENST00000444020 547 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.33□□□□□ -1.72
CHRNA4P43681 HSPE1P13-201ENST00000451143 297 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 BX276092.4-201ENST00000452056 248 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 RN7SL810P-201ENST00000493031 276 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 SNORD116-26-201ENST00000516006 96 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 RNU6-762P-201ENST00000517107 102 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.33□□□□□ -1.72
CHRNA4P43681 PARP1P2-201ENST00000556806 195 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 MIR5096-201ENST00000583713 70 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 AL020997.2-201ENST00000602607 184 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 MIR7154-201ENST00000620673 73 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 AL596275.2-206ENST00000641957 626 ntBASIC4.33□□□□□ -1.72
CHRNA4P43681 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CHRNA4P43681 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHRNA4P43681 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHRNA4P43681 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA4P43681 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.32□□□□□ -1.72
CHRNA4P43681 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
CHRNA4P43681 AC134026.1-201ENST00000623249 2239 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 Y_RNA.294-201ENST00000364916 102 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 RNU6-768P-201ENST00000384683 107 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 RNA5SP146-201ENST00000410743 123 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 AL157831.1-201ENST00000426134 473 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.32□□□□□ -1.72
CHRNA4P43681 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA4P43681 AC091153.1-201ENST00000466297 402 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 AC011276.1-201ENST00000469688 323 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 AC108145.1-201ENST00000503770 153 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 AC020593.1-201ENST00000507399 299 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 RNU6-155P-201ENST00000516347 100 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 AC006064.5-201ENST00000541782 248 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.32□□□□□ -1.72
CHRNA4P43681 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.32□□□□□ -1.72
CHRNA4P43681 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 ZNF702P-202ENST00000434269 1966 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CHRNA4P43681 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA4P43681 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA4P43681 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA4P43681 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA4P43681 MFSD8-242ENST00000641690 4199 ntBASIC4.32□□□□□ -1.72
CHRNA4P43681 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA4P43681 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA4P43681 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA4P43681 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA4P43681 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CHRNA4P43681 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CHRNA4P43681 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA4P43681 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA4P43681 RNU6-78P-201ENST00000362897 107 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 RNU6-105P-201ENST00000363909 104 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 SNORA70.2-201ENST00000364506 135 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 SNORA8.3-201ENST00000384679 139 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 Y_RNA.558-201ENST00000384685 113 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 RNU6-588P-201ENST00000410281 105 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 RPS23P7-201ENST00000466210 444 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 SCARNA8-201ENST00000515924 131 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 RNA5SP519-201ENST00000516480 119 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 RNU6-58P-201ENST00000517143 103 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA4P43681 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA4P43681 MIR4277-201ENST00000578298 84 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 Y_RNA.757-201ENST00000578934 114 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 AL356218.2-201ENST00000605264 187 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 AC106754.2-201ENST00000623006 233 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA4P43681 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA4P43681 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA4P43681 AC069528.2-201ENST00000624849 1991 ntBASIC4.31□□□□□ -1.72
CHRNA4P43681 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA4P43681 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA4P43681 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA4P43681 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA4P43681 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA4P43681 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA4P43681 RNA5SP509-201ENST00000364577 119 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 Y_RNA.280-201ENST00000364765 112 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 RNU6-905P-201ENST00000384434 107 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 MIR616-201ENST00000385293 97 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 MIR888-201ENST00000401186 77 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms