Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORA70.16-201ENST00000516390 95 ntBASIC-0.07□□□□□ -2.42
HTTP42858 HAUS1P3-201ENST00000523909 662 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.07□□□□□ -2.42
HTTP42858 AC007349.4-201ENST00000608114 532 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AC097372.4-201ENST00000625025 466 ntBASIC-0.07□□□□□ -2.42
HTTP42858 SNORD12-201ENST00000391002 90 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC093534.1-201ENST00000504977 132 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.08□□□□□ -2.42
HTTP42858 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.08□□□□□ -2.42
HTTP42858 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.08□□□□□ -2.42
HTTP42858 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.08□□□□□ -2.42
HTTP42858 AC008121.1-201ENST00000603244 268 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC004492.1-201ENST00000607036 742 ntBASIC-0.08□□□□□ -2.42
HTTP42858 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.08□□□□□ -2.42
HTTP42858 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.08□□□□□ -2.42
HTTP42858 RNU4-23P-201ENST00000362839 140 ntBASIC-0.08□□□□□ -2.42
HTTP42858 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.08□□□□□ -2.42
HTTP42858 SNORA32.1-201ENST00000364514 115 ntBASIC-0.08□□□□□ -2.42
HTTP42858 MIR29C-201ENST00000385231 88 ntBASIC-0.08□□□□□ -2.42
HTTP42858 MIR1267-201ENST00000408723 78 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.08□□□□□ -2.42
HTTP42858 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.08□□□□□ -2.42
HTTP42858 DDX3P2-201ENST00000446138 111 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC098869.1-201ENST00000481627 292 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.08□□□□□ -2.42
HTTP42858 RN7SKP12-201ENST00000516275 143 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.08□□□□□ -2.42
HTTP42858 AL355802.4-201ENST00000607635 548 ntBASIC-0.08□□□□□ -2.42
HTTP42858 AC104465.1-201ENST00000611365 139 ntBASIC-0.08□□□□□ -2.42
HTTP42858 RNU6-674P-201ENST00000363831 107 ntBASIC-0.09□□□□□ -2.42
HTTP42858 MIR597-201ENST00000384968 97 ntBASIC-0.09□□□□□ -2.42
HTTP42858 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.09□□□□□ -2.42
HTTP42858 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.09□□□□□ -2.42
HTTP42858 MRPS17P3-201ENST00000465453 385 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC010631.1-201ENST00000474150 156 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.09□□□□□ -2.42
HTTP42858 AL157871.3-201ENST00000557231 293 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AP000811.1-201ENST00000603803 651 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AL592221.1-201ENST00000605266 382 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AL121652.1-201ENST00000608851 448 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC073308.1-201ENST00000623696 305 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.09□□□□□ -2.42
HTTP42858 MIR302D-201ENST00000362275 68 ntBASIC-0.09□□□□□ -2.42
HTTP42858 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.09□□□□□ -2.42
HTTP42858 RNU6-414P-201ENST00000363705 104 ntBASIC-0.09□□□□□ -2.42
HTTP42858 RNU6-338P-201ENST00000383888 105 ntBASIC-0.09□□□□□ -2.42
HTTP42858 RNU6-110P-201ENST00000384508 104 ntBASIC-0.09□□□□□ -2.42
HTTP42858 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
HTTP42858 SNORD89-201ENST00000390981 114 ntBASIC-0.09□□□□□ -2.42
HTTP42858 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.09□□□□□ -2.42
HTTP42858 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.09□□□□□ -2.42
HTTP42858 AC138623.1-201ENST00000418060 216 ntBASIC-0.09□□□□□ -2.42
HTTP42858 C1DP1-201ENST00000426049 402 ntBASIC-0.09□□□□□ -2.42
HTTP42858 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.09□□□□□ -2.42
HTTP42858 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
HTTP42858 AC009033.1-201ENST00000624279 431 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC112487.2-201ENST00000637950 304 ntBASIC-0.09□□□□□ -2.42
HTTP42858 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.09□□□□□ -2.42
HTTP42858 SNORD1A-201ENST00000364968 72 ntBASIC-0.09□□□□□ -2.42
HTTP42858 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
HTTP42858 MIR200A-201ENST00000384875 90 ntBASIC-0.09□□□□□ -2.42
HTTP42858 RNU6-952P-201ENST00000391164 108 ntBASIC-0.09□□□□□ -2.42
HTTP42858 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.09□□□□□ -2.42
HTTP42858 RPS27P16-201ENST00000425758 201 ntBASIC-0.09□□□□□ -2.42
HTTP42858 MTND4P19-201ENST00000446659 478 ntBASIC-0.09□□□□□ -2.42
HTTP42858 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.09□□□□□ -2.42
HTTP42858 HMGB1P29-201ENST00000505659 499 ntBASIC-0.09□□□□□ -2.42
HTTP42858 RNU6-197P-201ENST00000516680 100 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.09□□□□□ -2.42
HTTP42858 AC034114.1-201ENST00000520293 285 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC233702.2-202ENST00000562547 291 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AC098614.4-201ENST00000607601 462 ntBASIC-0.09□□□□□ -2.42
HTTP42858 AL079343.1-201ENST00000572358 1771 ntBASIC-0.1□□□□□ -2.42
HTTP42858 MIR518A1-201ENST00000385068 85 ntBASIC-0.1□□□□□ -2.43
HTTP42858 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
HTTP42858 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.1□□□□□ -2.43
HTTP42858 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.1□□□□□ -2.43
HTTP42858 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.1□□□□□ -2.43
HTTP42858 RPS27AP8-201ENST00000452665 445 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC116347.2-201ENST00000514912 523 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.1□□□□□ -2.43
HTTP42858 AL355297.3-201ENST00000604082 446 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC004775.1-201ENST00000607389 753 ntBASIC-0.1□□□□□ -2.43
HTTP42858 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
HTTP42858 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.1□□□□□ -2.43
HTTP42858 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.1□□□□□ -2.43
HTTP42858 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC063976.4-201ENST00000421971 163 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC245047.7-201ENST00000440265 293 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC104689.1-201ENST00000473356 768 ntBASIC-0.1□□□□□ -2.43
HTTP42858 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.1□□□□□ -2.43
HTTP42858 RNU6-798P-201ENST00000516912 103 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC067904.2-201ENST00000517322 1283 ntBASIC-0.1□□□□□ -2.43
HTTP42858 AC007151.1-201ENST00000572774 483 ntBASIC-0.1□□□□□ -2.43
HTTP42858 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.1□□□□□ -2.43
HTTP42858 BPTFP1-201ENST00000579209 492 ntBASIC-0.1□□□□□ -2.43
HTTP42858 Z98751.3-201ENST00000604447 521 ntBASIC-0.1□□□□□ -2.43
HTTP42858 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.11□□□□□ -2.43
HTTP42858 RNU11-3P-201ENST00000391111 133 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms