Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC012409.4-201ENST00000612923 249 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AC108479.2-201ENST00000617314 601 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AC092140.2-201ENST00000618027 521 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AC093648.1-201ENST00000623546 606 ntBASIC1.6□□□□□ -2.15
RFC3P40938 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
RFC3P40938 MTND4P23-201ENST00000447723 1363 ntBASIC1.59□□□□□ -2.15
RFC3P40938 OR4G2P-201ENST00000328113 903 ntBASIC1.59□□□□□ -2.15
RFC3P40938 RNU6-457P-201ENST00000363999 107 ntBASIC1.59□□□□□ -2.15
RFC3P40938 RNU6-501P-201ENST00000364072 100 ntBASIC1.59□□□□□ -2.15
RFC3P40938 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.15
RFC3P40938 RNU6-546P-201ENST00000383991 107 ntBASIC1.59□□□□□ -2.15
RFC3P40938 RNA5SP465-201ENST00000391195 109 ntBASIC1.59□□□□□ -2.15
RFC3P40938 MIR1283-2-201ENST00000408621 87 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AL031779.1-201ENST00000415663 330 ntBASIC1.59□□□□□ -2.15
RFC3P40938 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RFC3P40938 AC098592.1-201ENST00000419352 333 ntBASIC1.59□□□□□ -2.15
RFC3P40938 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.59□□□□□ -2.15
RFC3P40938 USP9YP18-201ENST00000425912 695 ntBASIC1.59□□□□□ -2.15
RFC3P40938 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.59□□□□□ -2.15
RFC3P40938 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.59□□□□□ -2.15
RFC3P40938 HMGB1P18-201ENST00000438801 619 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.59□□□□□ -2.15
RFC3P40938 AC006026.2-201ENST00000457376 180 ntBASIC1.59□□□□□ -2.15
RFC3P40938 BZW1P2-201ENST00000473537 826 ntBASIC1.59□□□□□ -2.15
RFC3P40938 RN7SKP256-201ENST00000517201 314 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.59□□□□□ -2.15
RFC3P40938 AP003392.2-201ENST00000527269 208 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AL353778.1-201ENST00000603149 408 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AP000942.3-201ENST00000603702 160 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AL139286.2-201ENST00000606838 396 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AL031775.1-201ENST00000607014 887 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AC012360.2-201ENST00000609349 391 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AL132822.1-201ENST00000617063 513 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AC090517.3-201ENST00000625170 141 ntBASIC1.59□□□□□ -2.15
RFC3P40938 OR4G3P-201ENST00000633500 913 ntBASIC1.59□□□□□ -2.15
RFC3P40938 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RFC3P40938 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
RFC3P40938 Y_RNA.40-201ENST00000362645 93 ntBASIC1.58□□□□□ -2.16
RFC3P40938 RNA5SP212-201ENST00000391223 107 ntBASIC1.58□□□□□ -2.16
RFC3P40938 Y_RNA.608-201ENST00000410647 95 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC114491.1-201ENST00000416095 246 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC074117.2-201ENST00000417130 397 ntBASIC1.58□□□□□ -2.16
RFC3P40938 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AL365184.2-201ENST00000431139 435 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AL365400.1-201ENST00000431854 640 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC119618.1-201ENST00000434191 222 ntBASIC1.58□□□□□ -2.16
RFC3P40938 MTND5P2-201ENST00000442927 1142 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC245102.2-201ENST00000448956 180 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AL590365.1-201ENST00000450788 243 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.58□□□□□ -2.16
RFC3P40938 PRELID3BP1-201ENST00000457142 540 ntBASIC1.58□□□□□ -2.16
RFC3P40938 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.58□□□□□ -2.16
RFC3P40938 AC010587.1-201ENST00000505809 469 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC108078.2-201ENST00000510750 236 ntBASIC1.58□□□□□ -2.16
RFC3P40938 Y_RNA.687-201ENST00000516558 91 ntBASIC1.58□□□□□ -2.16
RFC3P40938 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.58□□□□□ -2.16
RFC3P40938 GNAI2P1-201ENST00000541815 315 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC018630.3-201ENST00000542637 96 ntBASIC1.58□□□□□ -2.16
RFC3P40938 TMF1P1-201ENST00000576058 373 ntBASIC1.58□□□□□ -2.16
RFC3P40938 DEFB131E-202ENST00000602581 683 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC105129.3-201ENST00000605455 485 ntBASIC1.58□□□□□ -2.16
RFC3P40938 Z82243.1-201ENST00000609432 473 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AP000240.1-201ENST00000609910 452 ntBASIC1.58□□□□□ -2.16
RFC3P40938 AC006927.3-201ENST00000638789 384 ntBASIC1.58□□□□□ -2.16
RFC3P40938 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RFC3P40938 RNU5F-6P-201ENST00000362979 116 ntBASIC1.57□□□□□ -2.16
RFC3P40938 RNU6-384P-201ENST00000364900 104 ntBASIC1.57□□□□□ -2.16
RFC3P40938 Y_RNA.338-201ENST00000365320 114 ntBASIC1.57□□□□□ -2.16
RFC3P40938 RNU6-39P-201ENST00000384344 107 ntBASIC1.57□□□□□ -2.16
RFC3P40938 MIR578-201ENST00000384828 96 ntBASIC1.57□□□□□ -2.16
RFC3P40938 CISD1P1-201ENST00000393907 327 ntBASIC1.57□□□□□ -2.16
RFC3P40938 MIR1262-201ENST00000408276 93 ntBASIC1.57□□□□□ -2.16
RFC3P40938 RNU6-584P-201ENST00000410350 95 ntBASIC1.57□□□□□ -2.16
RFC3P40938 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.57□□□□□ -2.16
RFC3P40938 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.57□□□□□ -2.16
RFC3P40938 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.57□□□□□ -2.16
RFC3P40938 AC107393.1-201ENST00000512403 346 ntBASIC1.57□□□□□ -2.16
RFC3P40938 AC117532.1-201ENST00000514638 323 ntBASIC1.57□□□□□ -2.16
RFC3P40938 RNU6-123P-201ENST00000516163 102 ntBASIC1.57□□□□□ -2.16
RFC3P40938 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.57□□□□□ -2.16
RFC3P40938 AC022616.8-201ENST00000533569 253 ntBASIC1.57□□□□□ -2.16
RFC3P40938 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC3P40938 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC3P40938 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC3P40938 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC3P40938 AC023043.2-201ENST00000589678 1026 ntBASIC1.57□□□□□ -2.16
RFC3P40938 BNIP3P25-201ENST00000596023 559 ntBASIC1.57□□□□□ -2.16
RFC3P40938 VN1R80P-201ENST00000597126 338 ntBASIC1.57□□□□□ -2.16
RFC3P40938 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.57□□□□□ -2.16
RFC3P40938 AL670379.2-201ENST00000604983 252 ntBASIC1.57□□□□□ -2.16
RFC3P40938 AL670379.4-201ENST00000605279 254 ntBASIC1.57□□□□□ -2.16
RFC3P40938 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.57□□□□□ -2.16
RFC3P40938 AC092192.1-201ENST00000633154 1018 ntBASIC1.57□□□□□ -2.16
RFC3P40938 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
RFC3P40938 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RFC3P40938 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RFC3P40938 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RFC3P40938 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RFC3P40938 RNU6-500P-201ENST00000362349 107 ntBASIC1.56□□□□□ -2.16
RFC3P40938 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms