Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR412-201ENST00000362142 91 ntBASIC1.33□□□□□ -2.2
RPA3P35244 snoU2_19.1-201ENST00000362361 80 ntBASIC1.33□□□□□ -2.2
RPA3P35244 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
RPA3P35244 RNU6-203P-201ENST00000384038 104 ntBASIC1.33□□□□□ -2.2
RPA3P35244 MIR10A-201ENST00000385043 110 ntBASIC1.33□□□□□ -2.2
RPA3P35244 RPS20P2-201ENST00000402520 389 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.33□□□□□ -2.2
RPA3P35244 USP9YP18-201ENST00000425912 695 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.33□□□□□ -2.2
RPA3P35244 RPL23AP30-201ENST00000432419 501 ntBASIC1.33□□□□□ -2.2
RPA3P35244 PTENP1-201ENST00000447117 1215 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AC027575.1-201ENST00000481064 460 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AC112206.3-201ENST00000514578 389 ntBASIC1.33□□□□□ -2.2
RPA3P35244 RN7SKP256-201ENST00000517201 314 ntBASIC1.33□□□□□ -2.2
RPA3P35244 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.33□□□□□ -2.2
RPA3P35244 AC107934.1-201ENST00000522215 217 ntBASIC1.33□□□□□ -2.2
RPA3P35244 MTATP6P15-201ENST00000527233 835 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AP003033.1-201ENST00000527244 415 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.33□□□□□ -2.2
RPA3P35244 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.33□□□□□ -2.2
RPA3P35244 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AL022154.1-201ENST00000604698 785 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AC099842.1-201ENST00000619919 596 ntBASIC1.33□□□□□ -2.2
RPA3P35244 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.33□□□□□ -2.2
RPA3P35244 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.32□□□□□ -2.2
RPA3P35244 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
RPA3P35244 RNU4-92P-201ENST00000363783 136 ntBASIC1.32□□□□□ -2.2
RPA3P35244 RNU6-960P-201ENST00000364056 120 ntBASIC1.32□□□□□ -2.2
RPA3P35244 RNU6-439P-201ENST00000384188 106 ntBASIC1.32□□□□□ -2.2
RPA3P35244 MIR30A-201ENST00000385092 71 ntBASIC1.32□□□□□ -2.2
RPA3P35244 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
RPA3P35244 CISD1P1-201ENST00000393907 327 ntBASIC1.32□□□□□ -2.2
RPA3P35244 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.32□□□□□ -2.2
RPA3P35244 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 AL627311.1-201ENST00000431514 115 ntBASIC1.32□□□□□ -2.2
RPA3P35244 AC015922.2-201ENST00000435593 184 ntBASIC1.32□□□□□ -2.2
RPA3P35244 AL121601.2-201ENST00000438019 707 ntBASIC1.32□□□□□ -2.2
RPA3P35244 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 AL357134.1-201ENST00000445848 426 ntBASIC1.32□□□□□ -2.2
RPA3P35244 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
RPA3P35244 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 USP9YP25-201ENST00000457708 443 ntBASIC1.32□□□□□ -2.2
RPA3P35244 RPL30P6-201ENST00000475925 342 ntBASIC1.32□□□□□ -2.2
RPA3P35244 FAM206BP-201ENST00000510179 541 ntBASIC1.32□□□□□ -2.2
RPA3P35244 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
RPA3P35244 RNVU1-2-201ENST00000516326 135 ntBASIC1.32□□□□□ -2.2
RPA3P35244 COPS8P3-201ENST00000526024 482 ntBASIC1.32□□□□□ -2.2
RPA3P35244 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RPA3P35244 AC018630.3-201ENST00000542637 96 ntBASIC1.32□□□□□ -2.2
RPA3P35244 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.32□□□□□ -2.2
RPA3P35244 WISP1-OT1-201ENST00000602893 642 ntBASIC1.32□□□□□ -2.2
RPA3P35244 AC010900.2-201ENST00000604508 210 ntBASIC1.32□□□□□ -2.2
RPA3P35244 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.32□□□□□ -2.2
RPA3P35244 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.32□□□□□ -2.2
RPA3P35244 AC091304.6-201ENST00000619761 202 ntBASIC1.32□□□□□ -2.2
RPA3P35244 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
RPA3P35244 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.32□□□□□ -2.2
RPA3P35244 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.32□□□□□ -2.2
RPA3P35244 SNORD14B-201ENST00000364533 90 ntBASIC1.31□□□□□ -2.2
RPA3P35244 SNORA48.1-201ENST00000390879 135 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AL033519.2-201ENST00000403958 392 ntBASIC1.31□□□□□ -2.2
RPA3P35244 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
RPA3P35244 RNA5SP100-201ENST00000410903 110 ntBASIC1.31□□□□□ -2.2
RPA3P35244 RNA5SP59-201ENST00000410922 110 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.31□□□□□ -2.2
RPA3P35244 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.31□□□□□ -2.2
RPA3P35244 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.31□□□□□ -2.2
RPA3P35244 HMGB1P31-201ENST00000437242 427 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.31□□□□□ -2.2
RPA3P35244 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.31□□□□□ -2.2
RPA3P35244 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.31□□□□□ -2.2
RPA3P35244 EXOSC3P1-201ENST00000448649 500 ntBASIC1.31□□□□□ -2.2
RPA3P35244 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
RPA3P35244 snoU13.14-201ENST00000459372 104 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC005908.1-201ENST00000468701 347 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC134050.1-201ENST00000495088 933 ntBASIC1.31□□□□□ -2.2
RPA3P35244 MTCYBP18-201ENST00000501056 747 ntBASIC1.31□□□□□ -2.2
RPA3P35244 MTCYBP40-201ENST00000509390 1135 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC093259.1-201ENST00000509755 300 ntBASIC1.31□□□□□ -2.2
RPA3P35244 RNU6-991P-201ENST00000516168 107 ntBASIC1.31□□□□□ -2.2
RPA3P35244 RNU2-10P-201ENST00000516375 211 ntBASIC1.31□□□□□ -2.2
RPA3P35244 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.31□□□□□ -2.2
RPA3P35244 SNORA44.1-201ENST00000517031 108 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC087441.2-201ENST00000529141 262 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AP003122.4-201ENST00000530980 758 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AL356057.1-201ENST00000533798 831 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.31□□□□□ -2.2
RPA3P35244 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.31□□□□□ -2.2
RPA3P35244 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.31□□□□□ -2.2
RPA3P35244 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.31□□□□□ -2.2
RPA3P35244 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.31□□□□□ -2.2
RPA3P35244 VN1R80P-201ENST00000597126 338 ntBASIC1.31□□□□□ -2.2
RPA3P35244 DEFB131E-202ENST00000602581 683 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC013244.3-201ENST00000605614 388 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC097478.2-201ENST00000610572 514 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms