Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.5□□□□□ -2.33
CKS2P33552 AC004817.2-201ENST00000561794 651 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS2P33552 MIR3664-201ENST00000579074 99 ntBASIC0.5□□□□□ -2.33
CKS2P33552 MTCO2P2-201ENST00000591258 225 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC022022.2-201ENST00000602989 360 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC025754.2-201ENST00000606491 432 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS2P33552 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.5□□□□□ -2.33
CKS2P33552 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CKS2P33552 AL391987.6-201ENST00000305671 199 ntBASIC0.49□□□□□ -2.33
CKS2P33552 RNU6-942P-201ENST00000363002 107 ntBASIC0.49□□□□□ -2.33
CKS2P33552 RNU6-1122P-201ENST00000384449 107 ntBASIC0.49□□□□□ -2.33
CKS2P33552 RNA5SP213-201ENST00000391031 106 ntBASIC0.49□□□□□ -2.33
CKS2P33552 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS2P33552 AC114482.1-201ENST00000418010 247 ntBASIC0.49□□□□□ -2.33
CKS2P33552 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS2P33552 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.49□□□□□ -2.33
CKS2P33552 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.49□□□□□ -2.33
CKS2P33552 HSPE1P13-201ENST00000451143 297 ntBASIC0.49□□□□□ -2.33
CKS2P33552 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS2P33552 RNU6-333P-201ENST00000459117 107 ntBASIC0.49□□□□□ -2.33
CKS2P33552 RPL39P36-201ENST00000490784 156 ntBASIC0.49□□□□□ -2.33
CKS2P33552 AC117454.1-201ENST00000491120 168 ntBASIC0.49□□□□□ -2.33
CKS2P33552 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS2P33552 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS2P33552 AC009646.1-201ENST00000510455 318 ntBASIC0.49□□□□□ -2.33
CKS2P33552 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.49□□□□□ -2.33
CKS2P33552 AC136628.3-201ENST00000521868 290 ntBASIC0.49□□□□□ -2.33
CKS2P33552 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.49□□□□□ -2.33
CKS2P33552 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CKS2P33552 HMGB1P33-201ENST00000563485 527 ntBASIC0.49□□□□□ -2.33
CKS2P33552 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.49□□□□□ -2.33
CKS2P33552 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.49□□□□□ -2.33
CKS2P33552 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.49□□□□□ -2.33
CKS2P33552 RNA5SP126-201ENST00000365092 109 ntBASIC0.48□□□□□ -2.33
CKS2P33552 Y_RNA.332-201ENST00000365271 113 ntBASIC0.48□□□□□ -2.33
CKS2P33552 RNU6-744P-201ENST00000365557 107 ntBASIC0.48□□□□□ -2.33
CKS2P33552 RNU6-1316P-201ENST00000384242 108 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AL356776.1-201ENST00000406574 447 ntBASIC0.48□□□□□ -2.33
CKS2P33552 SNORA11.2-201ENST00000408318 127 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC068533.2-201ENST00000411872 306 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.48□□□□□ -2.33
CKS2P33552 MTCO1P3-201ENST00000429327 192 ntBASIC0.48□□□□□ -2.33
CKS2P33552 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS2P33552 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.48□□□□□ -2.33
CKS2P33552 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.48□□□□□ -2.33
CKS2P33552 AC104563.1-201ENST00000476147 376 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS2P33552 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.48□□□□□ -2.33
CKS2P33552 RNA5SP503-201ENST00000517047 117 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.48□□□□□ -2.33
CKS2P33552 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS2P33552 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CKS2P33552 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS2P33552 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS2P33552 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS2P33552 AC060771.1-201ENST00000582031 164 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.48□□□□□ -2.33
CKS2P33552 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.48□□□□□ -2.33
CKS2P33552 BNIP3P9-201ENST00000603714 553 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC090578.1-201ENST00000604955 591 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC080078.3-201ENST00000605407 463 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC130324.3-201ENST00000614165 542 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC063943.3-201ENST00000615562 356 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AL356094.1-201ENST00000624663 1212 ntBASIC0.48□□□□□ -2.33
CKS2P33552 AC068647.2-201ENST00000637380 353 ntBASIC0.48□□□□□ -2.33
CKS2P33552 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
CKS2P33552 AL079343.1-201ENST00000572358 1771 ntBASIC0.47□□□□□ -2.33
CKS2P33552 MIR608-201ENST00000384820 100 ntBASIC0.47□□□□□ -2.33
CKS2P33552 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
CKS2P33552 BX664727.1-201ENST00000416024 466 ntBASIC0.47□□□□□ -2.33
CKS2P33552 EBAG9P1-201ENST00000418955 543 ntBASIC0.47□□□□□ -2.33
CKS2P33552 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
CKS2P33552 ZFAND6P1-201ENST00000434138 605 ntBASIC0.47□□□□□ -2.33
CKS2P33552 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.47□□□□□ -2.33
CKS2P33552 AC074344.1-201ENST00000512823 224 ntBASIC0.47□□□□□ -2.33
CKS2P33552 RNU5A-4P-201ENST00000516588 111 ntBASIC0.47□□□□□ -2.33
CKS2P33552 SNORA31.16-201ENST00000516773 139 ntBASIC0.47□□□□□ -2.33
CKS2P33552 RNU6-143P-201ENST00000516942 93 ntBASIC0.47□□□□□ -2.33
CKS2P33552 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.47□□□□□ -2.33
CKS2P33552 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.47□□□□□ -2.33
CKS2P33552 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.47□□□□□ -2.33
CKS2P33552 MIR4293-201ENST00000584305 78 ntBASIC0.47□□□□□ -2.33
CKS2P33552 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.47□□□□□ -2.33
CKS2P33552 VN1R107P-201ENST00000601784 209 ntBASIC0.47□□□□□ -2.33
CKS2P33552 AL590095.2-201ENST00000604136 117 ntBASIC0.47□□□□□ -2.33
CKS2P33552 AL358072.1-201ENST00000604156 575 ntBASIC0.47□□□□□ -2.33
CKS2P33552 BNIP3P31-201ENST00000604515 566 ntBASIC0.47□□□□□ -2.33
CKS2P33552 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.47□□□□□ -2.33
CKS2P33552 AC241585.2-209ENST00000638217 143 ntBASIC0.47□□□□□ -2.33
CKS2P33552 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.47□□□□□ -2.33
CKS2P33552 MTND4P21-201ENST00000453886 1357 ntBASIC0.46□□□□□ -2.34
CKS2P33552 MIR340-201ENST00000362125 95 ntBASIC0.46□□□□□ -2.34
CKS2P33552 RNU6-212P-201ENST00000362642 104 ntBASIC0.46□□□□□ -2.34
CKS2P33552 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CKS2P33552 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CKS2P33552 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS2P33552 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.46□□□□□ -2.34
CKS2P33552 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms