Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.63□□□□□ -2.31
SDC4P31431 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.63□□□□□ -2.31
SDC4P31431 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.63□□□□□ -2.31
SDC4P31431 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.63□□□□□ -2.31
SDC4P31431 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.63□□□□□ -2.31
SDC4P31431 AL356057.1-201ENST00000533798 831 ntBASIC0.63□□□□□ -2.31
SDC4P31431 AC093012.1-202ENST00000549403 582 ntBASIC0.63□□□□□ -2.31
SDC4P31431 AC136618.2-201ENST00000575091 400 ntBASIC0.63□□□□□ -2.31
SDC4P31431 AC015688.6-201ENST00000577737 104 ntBASIC0.63□□□□□ -2.31
SDC4P31431 AC243773.3-201ENST00000613270 256 ntBASIC0.63□□□□□ -2.31
SDC4P31431 AC120349.2-201ENST00000625002 298 ntBASIC0.63□□□□□ -2.31
SDC4P31431 AC100821.1-201ENST00000523153 2479 ntBASIC0.63□□□□□ -2.31
SDC4P31431 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SDC4P31431 RNU6-944P-201ENST00000364023 107 ntBASIC0.62□□□□□ -2.31
SDC4P31431 RNU6-1207P-201ENST00000384343 107 ntBASIC0.62□□□□□ -2.31
SDC4P31431 MTCO1P56-201ENST00000401674 224 ntBASIC0.62□□□□□ -2.31
SDC4P31431 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.62□□□□□ -2.31
SDC4P31431 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.62□□□□□ -2.31
SDC4P31431 AC104651.1-201ENST00000427559 735 ntBASIC0.62□□□□□ -2.31
SDC4P31431 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.62□□□□□ -2.31
SDC4P31431 MTND4LP7-201ENST00000431728 294 ntBASIC0.62□□□□□ -2.31
SDC4P31431 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.62□□□□□ -2.31
SDC4P31431 AL096829.2-201ENST00000446582 742 ntBASIC0.62□□□□□ -2.31
SDC4P31431 AC132479.1-201ENST00000449160 144 ntBASIC0.62□□□□□ -2.31
SDC4P31431 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.62□□□□□ -2.31
SDC4P31431 AL163195.1-201ENST00000496941 348 ntBASIC0.62□□□□□ -2.31
SDC4P31431 SNORA3.4-201ENST00000515969 96 ntBASIC0.62□□□□□ -2.31
SDC4P31431 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.62□□□□□ -2.31
SDC4P31431 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
SDC4P31431 MIR151B-201ENST00000584249 96 ntBASIC0.62□□□□□ -2.31
SDC4P31431 AP001981.2-201ENST00000603241 418 ntBASIC0.62□□□□□ -2.31
SDC4P31431 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.62□□□□□ -2.31
SDC4P31431 AC123767.1-202ENST00000620407 817 ntBASIC0.62□□□□□ -2.31
SDC4P31431 AC009033.1-201ENST00000624279 431 ntBASIC0.62□□□□□ -2.31
SDC4P31431 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
SDC4P31431 RNU6-655P-201ENST00000362858 107 ntBASIC0.61□□□□□ -2.31
SDC4P31431 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SDC4P31431 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SDC4P31431 RPL23AP32-201ENST00000395315 459 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AL161935.2-201ENST00000414627 60 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AL669831.1-202ENST00000428504 417 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AL591043.1-201ENST00000432461 424 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.61□□□□□ -2.31
SDC4P31431 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.61□□□□□ -2.31
SDC4P31431 AC010631.1-201ENST00000474150 156 ntBASIC0.61□□□□□ -2.31
SDC4P31431 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
SDC4P31431 SNORA31.3-201ENST00000516029 96 ntBASIC0.61□□□□□ -2.31
SDC4P31431 Y_RNA.676-201ENST00000516393 96 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AC023632.1-201ENST00000518463 375 ntBASIC0.61□□□□□ -2.31
SDC4P31431 CYCSP23-201ENST00000519781 313 ntBASIC0.61□□□□□ -2.31
SDC4P31431 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.61□□□□□ -2.31
SDC4P31431 AL512310.8-201ENST00000550183 120 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.61□□□□□ -2.31
SDC4P31431 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
SDC4P31431 CYP4A27P-201ENST00000567218 190 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AC126365.2-201ENST00000580630 379 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AC008088.1-201ENST00000580993 280 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AP003465.2-201ENST00000602571 373 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AC016727.2-201ENST00000603988 621 ntBASIC0.61□□□□□ -2.31
SDC4P31431 AC022513.1-201ENST00000624512 117 ntBASIC0.61□□□□□ -2.31
SDC4P31431 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.61□□□□□ -2.31
SDC4P31431 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SDC4P31431 Y_RNA.224-201ENST00000364308 111 ntBASIC0.6□□□□□ -2.31
SDC4P31431 RNU6-487P-201ENST00000365430 104 ntBASIC0.6□□□□□ -2.31
SDC4P31431 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
SDC4P31431 CBX3P9-201ENST00000402326 552 ntBASIC0.6□□□□□ -2.31
SDC4P31431 FTH1P15-201ENST00000406984 280 ntBASIC0.6□□□□□ -2.31
SDC4P31431 EBAG9P1-201ENST00000418955 543 ntBASIC0.6□□□□□ -2.31
SDC4P31431 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.6□□□□□ -2.31
SDC4P31431 MTND4P6-201ENST00000438297 472 ntBASIC0.6□□□□□ -2.31
SDC4P31431 AC114878.1-201ENST00000441166 358 ntBASIC0.6□□□□□ -2.31
SDC4P31431 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.6□□□□□ -2.31
SDC4P31431 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.6□□□□□ -2.31
SDC4P31431 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.6□□□□□ -2.31
SDC4P31431 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.6□□□□□ -2.31
SDC4P31431 SNORA76.2-201ENST00000517095 137 ntBASIC0.6□□□□□ -2.31
SDC4P31431 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.6□□□□□ -2.31
SDC4P31431 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.6□□□□□ -2.31
SDC4P31431 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.6□□□□□ -2.31
SDC4P31431 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.6□□□□□ -2.31
SDC4P31431 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.6□□□□□ -2.31
SDC4P31431 MZT1P2-201ENST00000604387 248 ntBASIC0.6□□□□□ -2.31
SDC4P31431 OR4G3P-201ENST00000633500 913 ntBASIC0.6□□□□□ -2.31
SDC4P31431 MIR3529-201ENST00000637713 78 ntBASIC0.6□□□□□ -2.31
SDC4P31431 RNU6-1210P-201ENST00000363775 107 ntBASIC0.59□□□□□ -2.31
SDC4P31431 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.59□□□□□ -2.31
SDC4P31431 AL158050.1-201ENST00000416077 457 ntBASIC0.59□□□□□ -2.31
SDC4P31431 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SDC4P31431 AC027644.1-201ENST00000419595 298 ntBASIC0.59□□□□□ -2.31
SDC4P31431 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 CBX3P6-201ENST00000430257 527 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.59□□□□□ -2.31
SDC4P31431 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 MTND2P20-201ENST00000440805 661 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.59□□□□□ -2.31
SDC4P31431 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.59□□□□□ -2.31
SDC4P31431 RNU1-131P-201ENST00000458943 161 ntBASIC0.59□□□□□ -2.31
SDC4P31431 RPL30P6-201ENST00000475925 342 ntBASIC0.59□□□□□ -2.31
SDC4P31431 HMGN2P9-201ENST00000476875 229 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms