Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNA5SP68-201ENST00000363885 119 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 RNU6-188P-201ENST00000364207 107 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 SNORD114-30-201ENST00000364448 72 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 SNORA67.4-201ENST00000384688 142 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AL138827.1-201ENST00000402666 306 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 RNA5SP21-201ENST00000410917 96 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.84□□□□□ -1.95
HOXC13P31276 ELOCP4-201ENST00000420090 333 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AC007560.1-201ENST00000426912 237 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXC13P31276 AC090096.1-201ENST00000489168 390 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AC007182.2-201ENST00000489251 402 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.84□□□□□ -1.95
HOXC13P31276 OR5BN1P-201ENST00000532955 829 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXC13P31276 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.84□□□□□ -1.95
HOXC13P31276 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.84□□□□□ -1.95
HOXC13P31276 AL355375.2-201ENST00000574825 175 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AC012119.1-201ENST00000603184 222 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AP000787.2-201ENST00000604432 568 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AC022893.3-201ENST00000607665 437 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AC040896.1-201ENST00000613819 479 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AC008121.3-201ENST00000618726 433 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 AL512643.1-201ENST00000635735 524 ntBASIC2.84□□□□□ -1.95
HOXC13P31276 FARSBP1-201ENST00000435808 1778 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HOXC13P31276 RNU5E-1-201ENST00000362477 120 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 U8.3-201ENST00000363321 132 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 Y_RNA.381-201ENST00000365666 102 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 MIR606-201ENST00000384851 96 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 RPL23AP32-201ENST00000395315 459 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.83□□□□□ -1.96
HOXC13P31276 AC112220.1-201ENST00000434628 355 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 AC009961.2-201ENST00000435771 251 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXC13P31276 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 HMGN2P10-201ENST00000448085 265 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC011753.1-201ENST00000451001 220 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXC13P31276 C1DP4-201ENST00000455429 424 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC080013.2-201ENST00000460866 323 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC090525.1-201ENST00000479116 478 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 RNU2-46P-201ENST00000517038 113 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 AC243972.3-201ENST00000539655 198 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 MIR3682-201ENST00000581338 84 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC243960.4-201ENST00000600532 288 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AL391646.1-201ENST00000603860 190 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC005046.1-201ENST00000608515 625 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC130324.3-201ENST00000614165 542 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 MIR6817-201ENST00000615588 66 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 HMGB1P24-202ENST00000615653 685 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AC006504.8-201ENST00000621046 635 ntBASIC2.83□□□□□ -1.96
HOXC13P31276 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HOXC13P31276 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXC13P31276 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXC13P31276 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.82□□□□□ -1.96
HOXC13P31276 Y_RNA.72-201ENST00000362894 103 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 RNU4-1-201ENST00000363925 141 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HOXC13P31276 RNU6-1103P-201ENST00000384150 107 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.82□□□□□ -1.96
HOXC13P31276 AL353193.1-201ENST00000421444 268 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AC007283.2-201ENST00000424739 197 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 RPL31P35-201ENST00000431058 377 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AL591704.1-201ENST00000432574 275 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 RPL7P54-201ENST00000438336 674 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 BRK1P2-201ENST00000442875 223 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AL513328.1-201ENST00000446460 224 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AL513124.1-201ENST00000450410 614 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 FABP5P13-201ENST00000452144 328 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.82□□□□□ -1.96
HOXC13P31276 ANXA2P1-201ENST00000505539 926 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 Y_RNA.689-201ENST00000516589 107 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXC13P31276 AC105029.1-201ENST00000520250 669 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 MIR3199-1-201ENST00000582434 88 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 VN1R80P-201ENST00000597126 338 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AL162413.1-201ENST00000603198 110 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AC124312.5-201ENST00000604451 268 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AC069294.1-201ENST00000608397 350 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 RMST_3.1-201ENST00000611651 109 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 MIR1302-1-201ENST00000637932 143 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HOXC13P31276 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.82□□□□□ -1.96
HOXC13P31276 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXC13P31276 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 RNA5SP289-201ENST00000362332 137 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 Y_RNA.216-201ENST00000364205 93 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 RNU6-190P-201ENST00000384154 102 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms