Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL031176.1-201ENST00000604554 466 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 AC105129.3-201ENST00000605455 485 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 AF129408.1-201ENST00000608767 431 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.13□□□□□ -2.39
CLIP1P30622 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.13□□□□□ -2.39
CLIP1P30622 AP003400.6-201ENST00000624698 740 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CLIP1P30622 RPS3AP36-201ENST00000398190 775 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.12□□□□□ -2.39
CLIP1P30622 RSL24D1P8-201ENST00000434442 492 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.12□□□□□ -2.39
CLIP1P30622 AL353706.1-201ENST00000436728 494 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.12□□□□□ -2.39
CLIP1P30622 RNA5SP168-201ENST00000516642 112 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.12□□□□□ -2.39
CLIP1P30622 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.12□□□□□ -2.39
CLIP1P30622 AC022616.8-201ENST00000533569 253 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 LSM6P2-201ENST00000552208 177 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 MIR4667-201ENST00000578933 66 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.12□□□□□ -2.39
CLIP1P30622 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CLIP1P30622 AC107075.1-201ENST00000613695 314 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 MTND1P37-201ENST00000636562 264 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 AC068647.2-201ENST00000637380 353 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 AC106858.1-201ENST00000637497 429 ntBASIC0.12□□□□□ -2.39
CLIP1P30622 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.11□□□□□ -2.39
CLIP1P30622 RNU6-1065P-201ENST00000384513 106 ntBASIC0.11□□□□□ -2.39
CLIP1P30622 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
CLIP1P30622 RNU2-15P-201ENST00000410692 191 ntBASIC0.11□□□□□ -2.39
CLIP1P30622 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.11□□□□□ -2.39
CLIP1P30622 AC010631.1-201ENST00000474150 156 ntBASIC0.11□□□□□ -2.39
CLIP1P30622 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.11□□□□□ -2.39
CLIP1P30622 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.11□□□□□ -2.39
CLIP1P30622 AC022483.1-201ENST00000514020 567 ntBASIC0.11□□□□□ -2.39
CLIP1P30622 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.11□□□□□ -2.39
CLIP1P30622 uc_338.22-201ENST00000622722 187 ntBASIC0.11□□□□□ -2.39
CLIP1P30622 AC017037.3-201ENST00000625016 472 ntBASIC0.11□□□□□ -2.39
CLIP1P30622 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.11□□□□□ -2.39
CLIP1P30622 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.1□□□□□ -2.39
CLIP1P30622 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.1□□□□□ -2.39
CLIP1P30622 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.1□□□□□ -2.39
CLIP1P30622 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CLIP1P30622 RNU2-33P-201ENST00000410344 192 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 AC104651.1-201ENST00000427559 735 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 MTCO3P5-201ENST00000433620 714 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 PTGES3P1-201ENST00000439531 483 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 AC068135.1-201ENST00000446164 246 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 AC011005.2-201ENST00000487324 359 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 RNU6-758P-201ENST00000516292 89 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 ARL2BPP5-201ENST00000523141 481 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.1□□□□□ -2.39
CLIP1P30622 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.1□□□□□ -2.39
CLIP1P30622 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.1□□□□□ -2.39
CLIP1P30622 AC015688.6-201ENST00000577737 104 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 Z83818.1-201ENST00000603584 150 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 AP001596.2-201ENST00000608410 312 ntBASIC0.1□□□□□ -2.39
CLIP1P30622 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.1□□□□□ -2.39
CLIP1P30622 RNU6-778P-201ENST00000363269 103 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 Y_RNA.124-201ENST00000363339 93 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 RNU6-112P-201ENST00000363599 104 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 AC127391.1-201ENST00000411737 98 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 AL392003.1-201ENST00000434394 243 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.09□□□□□ -2.4
CLIP1P30622 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.09□□□□□ -2.4
CLIP1P30622 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.09□□□□□ -2.4
CLIP1P30622 RPL30P1-201ENST00000488676 339 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 SNORA70.22-201ENST00000517160 124 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.09□□□□□ -2.4
CLIP1P30622 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
CLIP1P30622 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.09□□□□□ -2.4
CLIP1P30622 AL583856.2-201ENST00000606298 543 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 AL365434.2-201ENST00000607979 234 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 AC093913.1-201ENST00000614178 329 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 U2.21-201ENST00000637295 81 ntBASIC0.09□□□□□ -2.4
CLIP1P30622 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 USP9YP19-201ENST00000412165 485 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.08□□□□□ -2.4
CLIP1P30622 USP9YP13-201ENST00000417797 480 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 PTGES3P4-201ENST00000426243 356 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 UBE2V1P8-201ENST00000437166 265 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 HMGN3P1-201ENST00000453847 193 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.08□□□□□ -2.4
CLIP1P30622 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.08□□□□□ -2.4
CLIP1P30622 SNORD116-30-201ENST00000516468 85 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 RNA5SP503-201ENST00000517047 117 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 RNA5SP291-201ENST00000517222 105 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.08□□□□□ -2.4
CLIP1P30622 AP000763.2-201ENST00000540641 163 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 AC079598.5-201ENST00000547460 117 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.08□□□□□ -2.4
CLIP1P30622 NACAP3-201ENST00000552100 481 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 AC091489.2-201ENST00000566263 604 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 SNORD39.3-201ENST00000584451 71 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 KATNBL1P5-201ENST00000605015 517 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.08□□□□□ -2.4
CLIP1P30622 AC004067.1-201ENST00000608733 700 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.08□□□□□ -2.4
CLIP1P30622 AC004908.3-201ENST00000610248 625 ntBASIC0.08□□□□□ -2.4
CLIP1P30622 AL132822.1-201ENST00000617063 513 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms