Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC010378.1-201ENST00000619270 362 ntBASIC2.59□□□□□ -1.99
PTPN3P26045 AC092608.2-201ENST00000624427 218 ntBASIC2.59□□□□□ -1.99
PTPN3P26045 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -2
PTPN3P26045 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.58□□□□□ -2
PTPN3P26045 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PTPN3P26045 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PTPN3P26045 RNU6-858P-201ENST00000362436 107 ntBASIC2.58□□□□□ -2
PTPN3P26045 RNU6-942P-201ENST00000363002 107 ntBASIC2.58□□□□□ -2
PTPN3P26045 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
PTPN3P26045 SNORA38-201ENST00000363946 132 ntBASIC2.58□□□□□ -2
PTPN3P26045 MIR218-1-201ENST00000384999 110 ntBASIC2.58□□□□□ -2
PTPN3P26045 RNA5SP184-201ENST00000411071 108 ntBASIC2.58□□□□□ -2
PTPN3P26045 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.58□□□□□ -2
PTPN3P26045 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.58□□□□□ -2
PTPN3P26045 MTCO1P20-201ENST00000425366 358 ntBASIC2.58□□□□□ -2
PTPN3P26045 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.58□□□□□ -2
PTPN3P26045 CALM1P1-201ENST00000442082 433 ntBASIC2.58□□□□□ -2
PTPN3P26045 HIGD1AP2-201ENST00000446367 280 ntBASIC2.58□□□□□ -2
PTPN3P26045 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.58□□□□□ -2
PTPN3P26045 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.58□□□□□ -2
PTPN3P26045 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.58□□□□□ -2
PTPN3P26045 AC098799.2-201ENST00000509466 868 ntBASIC2.58□□□□□ -2
PTPN3P26045 RNA5SP401-201ENST00000515920 127 ntBASIC2.58□□□□□ -2
PTPN3P26045 SNORA25.17-201ENST00000517184 124 ntBASIC2.58□□□□□ -2
PTPN3P26045 CENPUP1-201ENST00000526649 1202 ntBASIC2.58□□□□□ -2
PTPN3P26045 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.58□□□□□ -2
PTPN3P26045 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
PTPN3P26045 BNIP3P6-201ENST00000549284 499 ntBASIC2.58□□□□□ -2
PTPN3P26045 OR11H5P-201ENST00000554039 926 ntBASIC2.58□□□□□ -2
PTPN3P26045 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.58□□□□□ -2
PTPN3P26045 U2.17-201ENST00000611454 95 ntBASIC2.58□□□□□ -2
PTPN3P26045 Z69720.2-201ENST00000624755 279 ntBASIC2.58□□□□□ -2
PTPN3P26045 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
PTPN3P26045 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PTPN3P26045 HAUS6P2-201ENST00000433254 2404 ntBASIC2.57□□□□□ -2
PTPN3P26045 AC138393.1-203ENST00000327086 343 ntBASIC2.57□□□□□ -2
PTPN3P26045 RNU4-20P-201ENST00000365601 151 ntBASIC2.57□□□□□ -2
PTPN3P26045 Y_RNA.619-201ENST00000410951 90 ntBASIC2.57□□□□□ -2
PTPN3P26045 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.57□□□□□ -2
PTPN3P26045 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.57□□□□□ -2
PTPN3P26045 AC006026.2-201ENST00000457376 180 ntBASIC2.57□□□□□ -2
PTPN3P26045 DYNLL1P5-201ENST00000467158 270 ntBASIC2.57□□□□□ -2
PTPN3P26045 MTCO3P38-201ENST00000468910 766 ntBASIC2.57□□□□□ -2
PTPN3P26045 AC090096.1-201ENST00000489168 390 ntBASIC2.57□□□□□ -2
PTPN3P26045 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN3P26045 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
PTPN3P26045 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.57□□□□□ -2
PTPN3P26045 AC105245.1-201ENST00000581934 244 ntBASIC2.57□□□□□ -2
PTPN3P26045 RNU6-91P-201ENST00000607774 107 ntBASIC2.57□□□□□ -2
PTPN3P26045 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN3P26045 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
PTPN3P26045 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.57□□□□□ -2
PTPN3P26045 MIR3688-2-201ENST00000636963 87 ntBASIC2.57□□□□□ -2
PTPN3P26045 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.57□□□□□ -2
PTPN3P26045 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.57□□□□□ -2
PTPN3P26045 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.56□□□□□ -2
PTPN3P26045 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
PTPN3P26045 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
PTPN3P26045 Y_RNA.231-201ENST00000364358 102 ntBASIC2.56□□□□□ -2
PTPN3P26045 Y_RNA.324-201ENST00000365165 102 ntBASIC2.56□□□□□ -2
PTPN3P26045 RNU4-12P-201ENST00000365233 139 ntBASIC2.56□□□□□ -2
PTPN3P26045 RNU6-487P-201ENST00000365430 104 ntBASIC2.56□□□□□ -2
PTPN3P26045 RNU6-1072P-201ENST00000384703 107 ntBASIC2.56□□□□□ -2
PTPN3P26045 Y_RNA.573-201ENST00000384763 105 ntBASIC2.56□□□□□ -2
PTPN3P26045 RNU6-443P-201ENST00000384780 107 ntBASIC2.56□□□□□ -2
PTPN3P26045 MIR196B-201ENST00000384852 84 ntBASIC2.56□□□□□ -2
PTPN3P26045 RPS4XP7-201ENST00000406274 780 ntBASIC2.56□□□□□ -2
PTPN3P26045 FTH1P15-201ENST00000406984 280 ntBASIC2.56□□□□□ -2
PTPN3P26045 MIR548F1-201ENST00000408667 84 ntBASIC2.56□□□□□ -2
PTPN3P26045 RNU6-1068P-201ENST00000410958 103 ntBASIC2.56□□□□□ -2
PTPN3P26045 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.56□□□□□ -2
PTPN3P26045 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.56□□□□□ -2
PTPN3P26045 NUP35P1-201ENST00000422734 947 ntBASIC2.56□□□□□ -2
PTPN3P26045 RPS3AP44-201ENST00000425466 790 ntBASIC2.56□□□□□ -2
PTPN3P26045 SRIP2-201ENST00000428470 166 ntBASIC2.56□□□□□ -2
PTPN3P26045 RPL30P4-201ENST00000429309 333 ntBASIC2.56□□□□□ -2
PTPN3P26045 AC004383.1-201ENST00000438135 289 ntBASIC2.56□□□□□ -2
PTPN3P26045 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.56□□□□□ -2
PTPN3P26045 AC012308.1-201ENST00000451232 178 ntBASIC2.56□□□□□ -2
PTPN3P26045 FGF7P6-202ENST00000451282 293 ntBASIC2.56□□□□□ -2
PTPN3P26045 AC008571.1-201ENST00000467232 300 ntBASIC2.56□□□□□ -2
PTPN3P26045 RPL36AP48-201ENST00000485521 314 ntBASIC2.56□□□□□ -2
PTPN3P26045 MRPL42P6-201ENST00000486397 371 ntBASIC2.56□□□□□ -2
PTPN3P26045 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
PTPN3P26045 AC018437.1-201ENST00000492214 406 ntBASIC2.56□□□□□ -2
PTPN3P26045 Y_RNA.654-201ENST00000497848 106 ntBASIC2.56□□□□□ -2
PTPN3P26045 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.56□□□□□ -2
PTPN3P26045 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.56□□□□□ -2
PTPN3P26045 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.56□□□□□ -2
PTPN3P26045 Y_RNA.687-201ENST00000516558 91 ntBASIC2.56□□□□□ -2
PTPN3P26045 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.56□□□□□ -2
PTPN3P26045 AC090136.1-201ENST00000520009 240 ntBASIC2.56□□□□□ -2
PTPN3P26045 CYCSP27-201ENST00000527643 293 ntBASIC2.56□□□□□ -2
PTPN3P26045 CR383656.8-201ENST00000549046 145 ntBASIC2.56□□□□□ -2
PTPN3P26045 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.56□□□□□ -2
PTPN3P26045 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.56□□□□□ -2
PTPN3P26045 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.56□□□□□ -2
PTPN3P26045 MIR5571-201ENST00000577998 113 ntBASIC2.56□□□□□ -2
PTPN3P26045 AL670379.10-201ENST00000604330 253 ntBASIC2.56□□□□□ -2
PTPN3P26045 AL670379.9-201ENST00000605428 253 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms