Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL591043.1-201ENST00000432461 424 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AL445567.1-201ENST00000439121 144 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 SNRPGP9-201ENST00000456025 225 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 SNORD42A-201ENST00000459584 64 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 MTCYBP40-201ENST00000509390 1135 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC104136.1-201ENST00000512969 394 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC060788.1-201ENST00000521318 469 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC027807.1-201ENST00000559921 996 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC004908.3-201ENST00000610248 625 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AC008993.2-201ENST00000631744 806 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AL359851.1-201ENST00000569460 4997 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 snoU2_19.1-201ENST00000362361 80 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 SNORD115-3-201ENST00000363100 82 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 RNU6-1097P-201ENST00000363586 107 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 SNORA70B-201ENST00000384210 135 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 RNU6-74P-201ENST00000384235 107 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 MIR454-201ENST00000390180 115 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 CYCSP33-201ENST00000414485 327 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AL353752.1-201ENST00000454946 260 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 SNORA18.6-201ENST00000516792 115 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 RN7SKP256-201ENST00000517201 314 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AP003072.2-201ENST00000527756 676 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 LRRC37A5P-203ENST00000580181 585 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 Z84480.1-201ENST00000605131 311 ntBASIC2.18□□□□□ -2.06
HLA-DPA1P20036 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DPA1P20036 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPA1P20036 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 FGF7P2-201ENST00000332473 296 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RNU6-108P-201ENST00000365558 107 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RNU6-297P-201ENST00000384636 107 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 MIR29B2-201ENST00000385055 81 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RNU2-48P-201ENST00000410694 191 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 MTND2P18-201ENST00000419962 1030 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 OOSP1P1-201ENST00000423265 274 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 USP9YP18-201ENST00000425912 695 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 MTND2P4-201ENST00000445034 1004 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RPL39P29-201ENST00000447779 157 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AL162395.1-201ENST00000457882 422 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RNU7-182P-201ENST00000459009 62 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RPL30P1-201ENST00000488676 339 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPA1P20036 RNU6-1178P-201ENST00000516674 107 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.17□□□□□ -2.06
HLA-DPA1P20036 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPA1P20036 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 MIR4775-201ENST00000581168 75 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC078795.2-201ENST00000602835 1252 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC245014.2-201ENST00000603689 287 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC064872.1-201ENST00000604823 1072 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AC246785.4-201ENST00000605374 287 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 Z99289.3-201ENST00000605586 594 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 AL159153.1-201ENST00000619688 317 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 SEPT14P19-203ENST00000633205 211 ntBASIC2.17□□□□□ -2.06
HLA-DPA1P20036 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 RNU6-944P-201ENST00000364023 107 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 SNORA80E-201ENST00000384744 137 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 MIR1-2-201ENST00000384961 85 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 BX295541.1-201ENST00000417774 250 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AL139415.2-201ENST00000431968 163 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AL118520.1-201ENST00000450770 291 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 RPL23AP3-201ENST00000453844 468 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 RNA5SP269-201ENST00000459032 137 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms