Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.07□□□□□ -2.08
XRCC1P18887 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.07□□□□□ -2.08
XRCC1P18887 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.07□□□□□ -2.08
XRCC1P18887 RNU6-956P-201ENST00000458868 103 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 snoU109.2-201ENST00000459316 135 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 GMFBP1-201ENST00000467831 427 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.07□□□□□ -2.08
XRCC1P18887 AF213884.2-201ENST00000510417 903 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.07□□□□□ -2.08
XRCC1P18887 SMURF2P1-201ENST00000514992 481 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 RNU6-445P-201ENST00000516949 107 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 MTCO2P4-201ENST00000517968 247 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 AC136619.2-201ENST00000563361 631 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 AL121917.1-203ENST00000605534 577 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 AC005332.10-201ENST00000612725 619 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 AC099842.1-201ENST00000619919 596 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.07□□□□□ -2.08
XRCC1P18887 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.07□□□□□ -2.08
XRCC1P18887 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
XRCC1P18887 SNORD114-1-201ENST00000362705 72 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 Y_RNA.77-201ENST00000362962 107 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 RNU6-116P-201ENST00000384042 109 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 RNU6-456P-201ENST00000384493 107 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 RNU6-550P-201ENST00000391057 101 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 RNU4-46P-201ENST00000410818 138 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.06□□□□□ -2.08
XRCC1P18887 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.06□□□□□ -2.08
XRCC1P18887 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.06□□□□□ -2.08
XRCC1P18887 SRIP2-201ENST00000428470 166 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AL596276.1-201ENST00000434465 418 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AC016691.1-201ENST00000441321 413 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 CALM1P1-201ENST00000442082 433 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 MTND2P4-201ENST00000445034 1004 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AC079448.1-201ENST00000449377 373 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 DYNLL1P5-201ENST00000467158 270 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 Y_RNA.688-201ENST00000516565 95 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 RNA5SP503-201ENST00000517047 117 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.06□□□□□ -2.08
XRCC1P18887 AL391840.1-201ENST00000571144 367 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 BNIP3P30-201ENST00000601184 574 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 Z84480.1-201ENST00000605131 311 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AL138963.2-201ENST00000605137 226 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AC021646.1-201ENST00000605469 484 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AC008945.2-201ENST00000606056 604 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AL031601.2-202ENST00000622650 282 ntBASIC2.06□□□□□ -2.08
XRCC1P18887 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.06□□□□□ -2.08
XRCC1P18887 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
XRCC1P18887 RBBP8P1-201ENST00000449447 1844 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
XRCC1P18887 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
XRCC1P18887 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
XRCC1P18887 RNU6-606P-201ENST00000384721 111 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 MIR1-2-201ENST00000384961 85 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AL133475.1-201ENST00000404414 305 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 RNA5SP390-201ENST00000410191 113 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 RNU6-607P-201ENST00000411283 108 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AC138623.1-201ENST00000418060 216 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 EIF4EP4-201ENST00000424916 578 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.05□□□□□ -2.08
XRCC1P18887 AL445646.1-201ENST00000431784 216 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
XRCC1P18887 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.05□□□□□ -2.08
XRCC1P18887 USP9YP29-201ENST00000445112 563 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AC132479.1-201ENST00000449160 144 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 C1DP4-201ENST00000455429 424 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 CKS1BP2-201ENST00000497342 240 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AC079140.5-201ENST00000507882 310 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AC074344.1-201ENST00000512823 224 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.05□□□□□ -2.08
XRCC1P18887 LRRC34P2-201ENST00000514850 553 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 Y_RNA.687-201ENST00000516558 91 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 RNU6-430P-201ENST00000517078 107 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AP002963.1-201ENST00000530590 184 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AC135279.1-201ENST00000543493 504 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 MIR4528-201ENST00000577763 90 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.05□□□□□ -2.08
XRCC1P18887 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.05□□□□□ -2.08
XRCC1P18887 AC026585.1-201ENST00000619582 524 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.05□□□□□ -2.08
XRCC1P18887 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
XRCC1P18887 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
XRCC1P18887 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
XRCC1P18887 RNU6-282P-201ENST00000365357 103 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 RNU6-45P-201ENST00000384471 107 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.04□□□□□ -2.08
XRCC1P18887 UBE2V1P10-201ENST00000414685 269 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.04□□□□□ -2.08
XRCC1P18887 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.04□□□□□ -2.08
XRCC1P18887 AL031667.1-201ENST00000440222 725 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 MTND1P18-201ENST00000448191 573 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms