Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 U6.99-201ENST00000637524 83 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPRAP18433 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPRAP18433 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPRAP18433 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPRAP18433 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPRAP18433 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTPRAP18433 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTPRAP18433 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRAP18433 ZNF826P-207ENST00000622273 1910 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 Z73965.1-201ENST00000623412 2297 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPRAP18433 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRAP18433 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRAP18433 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRAP18433 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PTPRAP18433 RNU6-527P-201ENST00000363425 104 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 RNU6-1286P-201ENST00000383871 107 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 Y_RNA.569-201ENST00000384749 103 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRAP18433 MIR1290-201ENST00000408735 78 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 Y_RNA.590-201ENST00000410140 107 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 SNORD12B-201ENST00000410433 91 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 ATP5A1P2-201ENST00000412323 255 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRAP18433 AC124916.1-201ENST00000444020 547 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 SNORD108-201ENST00000459332 71 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 AF186996.7-201ENST00000492781 209 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 RPL23AP49-201ENST00000492925 468 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 Y_RNA.662-201ENST00000516028 97 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 Y_RNA.679-201ENST00000516416 91 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPRAP18433 SNRPGP15-201ENST00000600149 222 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 AC004832.4-201ENST00000608952 331 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPRAP18433 AL079305.1-201ENST00000623159 3008 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPRAP18433 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
PTPRAP18433 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTPRAP18433 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.44□□□□□ -1.7
PTPRAP18433 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRAP18433 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRAP18433 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 SNORD115-32-201ENST00000364079 82 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 Y_RNA.275-201ENST00000364726 110 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RNY1P5-201ENST00000383890 115 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RNU6-21P-201ENST00000384710 107 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RNA5SP213-201ENST00000391031 106 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RNU1-139P-201ENST00000391307 165 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RNU2-61P-201ENST00000411069 191 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RPL21P104-201ENST00000464143 478 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 AC091021.1-201ENST00000468051 388 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 BTF3L4P4-201ENST00000506381 449 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RNU6-1114P-201ENST00000516022 107 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 RNU7-110P-201ENST00000516891 62 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 CYP4A43P-201ENST00000568156 121 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 MIR4782-201ENST00000577987 79 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 AL078605.1-201ENST00000603529 500 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPRAP18433 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PTPRAP18433 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRAP18433 AC007390.2-201ENST00000606229 3803 ntBASIC4.43□□□□□ -1.7
PTPRAP18433 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPRAP18433 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPRAP18433 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPRAP18433 SNORA25.1-201ENST00000362326 128 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 MIR218-2-201ENST00000385006 110 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 MIR153-2-201ENST00000385225 87 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 MIR613-201ENST00000385248 95 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPRAP18433 RNA5SP31-201ENST00000411144 127 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPRAP18433 SNRPEP9-201ENST00000436794 238 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 HLA-N-201ENST00000437516 135 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPRAP18433 AC073901.1-201ENST00000462471 408 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 AC087477.1-201ENST00000465747 340 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 AC091874.1-201ENST00000511402 339 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPRAP18433 RNU7-200P-201ENST00000516105 62 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 SNORA70.16-201ENST00000516390 95 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 SNORA43.2-201ENST00000516652 128 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 MTND5P41-201ENST00000517498 206 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPRAP18433 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPRAP18433 TRAV28-201ENST00000557548 323 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 MIR4423-201ENST00000580922 80 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPRAP18433 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PTPRAP18433 AC135776.4-201ENST00000624300 1904 ntBASIC4.42□□□□□ -1.7
PTPRAP18433 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTPRAP18433 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms