Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
HIST1H1DP16402 AF038458.1-201ENST00000588406 262 ntBASIC0.35□□□□□ -2.35
HIST1H1DP16402 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.35□□□□□ -2.35
HIST1H1DP16402 AL365434.2-201ENST00000607979 234 ntBASIC0.35□□□□□ -2.35
HIST1H1DP16402 AC093788.1-201ENST00000609356 927 ntBASIC0.35□□□□□ -2.35
HIST1H1DP16402 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.35□□□□□ -2.35
HIST1H1DP16402 MIR6715A-201ENST00000615929 79 ntBASIC0.35□□□□□ -2.35
HIST1H1DP16402 RMST_10.1-201ENST00000616309 154 ntBASIC0.35□□□□□ -2.35
HIST1H1DP16402 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.35□□□□□ -2.35
HIST1H1DP16402 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
HIST1H1DP16402 AC068647.2-201ENST00000637380 353 ntBASIC0.35□□□□□ -2.35
HIST1H1DP16402 RNA5SP361-201ENST00000362686 118 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 MIR200A-201ENST00000384875 90 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 MIR548B-201ENST00000385247 97 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 RPS3AP1-201ENST00000413190 320 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 AC138623.1-201ENST00000418060 216 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 CETN4P-201ENST00000432407 469 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 AC234064.1-201ENST00000436312 247 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 AL078601.1-201ENST00000444542 271 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 TMEM251P1-201ENST00000503717 318 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 RNA5SP481-201ENST00000516814 122 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.34□□□□□ -2.36
HIST1H1DP16402 MIR4666A-201ENST00000580160 79 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 MIR4714-201ENST00000580728 77 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 AC132825.7-201ENST00000638744 335 ntBASIC0.34□□□□□ -2.36
HIST1H1DP16402 RNU6-655P-201ENST00000362858 107 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 RNY1P10-201ENST00000363268 113 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 RNU6-1066P-201ENST00000363573 105 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 SNORD65C-201ENST00000390962 71 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 SNORD12-201ENST00000391002 90 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 CBX3P9-201ENST00000402326 552 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 TPTE2P1-204ENST00000435256 593 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 RPS27AP8-201ENST00000452665 445 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 MTND2P6-201ENST00000455337 1030 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 RNU6-333P-201ENST00000459117 107 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 RNU6-714P-201ENST00000516963 103 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 MIR4769-201ENST00000584126 77 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 AC022432.1-201ENST00000595739 310 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.33□□□□□ -2.36
HIST1H1DP16402 AC104465.1-201ENST00000611365 139 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 MIR1248-201ENST00000629190 106 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HIST1H1DP16402 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
HIST1H1DP16402 RNU6-288P-201ENST00000363690 104 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 RNU6-1210P-201ENST00000363775 107 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 SNORD114-6-201ENST00000364393 72 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 RNU6-487P-201ENST00000365430 104 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 RNU6-898P-201ENST00000365627 104 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC244023.1-201ENST00000426884 112 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC092628.1-201ENST00000436250 252 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 BTF3P15-201ENST00000455606 336 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 RNA5SP168-201ENST00000516642 112 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 RN7SKP258-201ENST00000517151 304 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 RNA5SP437-201ENST00000517249 129 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 AL356057.1-201ENST00000533798 831 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 FAM106DP-201ENST00000586416 501 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 VN1R82P-201ENST00000601481 356 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC242498.1-201ENST00000604134 111 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC107304.1-201ENST00000604229 296 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC083806.3-201ENST00000614016 455 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC243994.1-201ENST00000618627 109 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.32□□□□□ -2.36
HIST1H1DP16402 MIR1322-201ENST00000638013 71 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 AC023934.1-201ENST00000574529 2389 ntBASIC0.32□□□□□ -2.36
HIST1H1DP16402 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
HIST1H1DP16402 RNA5SP347-201ENST00000362445 119 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 RNU4-12P-201ENST00000365233 139 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 TPMTP2-201ENST00000414372 726 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 AC063976.4-201ENST00000421971 163 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 MTCYBP15-201ENST00000433123 1127 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 COX7BP2-201ENST00000437976 242 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 AL358794.1-201ENST00000445689 381 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 MTCO2P25-201ENST00000447065 681 ntBASIC0.31□□□□□ -2.36
HIST1H1DP16402 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms