Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 NUP35P1-201ENST00000422734 947 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 AL356867.1-201ENST00000429623 299 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 USP9YP30-201ENST00000430729 455 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.69□□□□□ -1.82
SNRPA1P09661 HMGN2P20-201ENST00000437531 273 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 PIGFP3-201ENST00000441918 722 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.69□□□□□ -1.82
SNRPA1P09661 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.69□□□□□ -1.82
SNRPA1P09661 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.69□□□□□ -1.82
SNRPA1P09661 FABP5P15-201ENST00000453566 214 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.69□□□□□ -1.82
SNRPA1P09661 KC877373.1-201ENST00000479066 408 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 RN7SL633P-201ENST00000488974 297 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 AL160314.1-201ENST00000490836 438 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.69□□□□□ -1.82
SNRPA1P09661 RNA5SP290-201ENST00000517133 127 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.69□□□□□ -1.82
SNRPA1P09661 TRAV37-201ENST00000553906 342 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.69□□□□□ -1.82
SNRPA1P09661 AC123912.5-201ENST00000605470 343 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.69□□□□□ -1.82
SNRPA1P09661 AL049641.1-201ENST00000441055 1948 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNRPA1P09661 AL355596.1-201ENST00000565399 3996 ntBASIC3.69□□□□□ -1.82
SNRPA1P09661 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SNRPA1P09661 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNRPA1P09661 MTND4P1-201ENST00000457501 1466 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNRPA1P09661 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNRPA1P09661 Y_RNA.112-201ENST00000363250 102 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 Y_RNA.151-201ENST00000363566 112 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 RNU6-1329P-201ENST00000365664 107 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SNRPA1P09661 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 UBE2D3P2-201ENST00000424409 445 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 UBE2V1P4-201ENST00000425374 344 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.68□□□□□ -1.82
SNRPA1P09661 CECR9-201ENST00000453421 199 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 HMGB1P30-201ENST00000492455 606 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.68□□□□□ -1.82
SNRPA1P09661 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.68□□□□□ -1.82
SNRPA1P09661 MIR892C-201ENST00000516410 77 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.68□□□□□ -1.82
SNRPA1P09661 DNAJC8P1-201ENST00000554535 372 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 OR1M4P-201ENST00000589199 287 ntBASIC3.68□□□□□ -1.82
SNRPA1P09661 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNRPA1P09661 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
SNRPA1P09661 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SNRPA1P09661 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SNRPA1P09661 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
SNRPA1P09661 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNRPA1P09661 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SNRPA1P09661 Y_RNA.5-201ENST00000362334 102 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 RNU6-1115P-201ENST00000362490 106 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 Y_RNA.28-201ENST00000362554 111 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 RNU6-639P-201ENST00000384074 107 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 RNU6-331P-201ENST00000384724 107 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 AL445529.1-201ENST00000398713 389 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 MIR1290-201ENST00000408735 78 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 RNU2-33P-201ENST00000410344 192 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.67□□□□□ -1.82
SNRPA1P09661 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.67□□□□□ -1.82
SNRPA1P09661 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.67□□□□□ -1.82
SNRPA1P09661 PTP4A1P4-201ENST00000512479 322 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 RNU6-988P-201ENST00000519081 107 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 MIR4474-201ENST00000579189 78 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.67□□□□□ -1.82
SNRPA1P09661 AC008737.2-201ENST00000599446 118 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 AC011890.2-201ENST00000613393 294 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 U7.8-201ENST00000619968 63 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SNRPA1P09661 AC005183.1-201ENST00000603687 1979 ntBASIC3.67□□□□□ -1.82
SNRPA1P09661 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRPA1P09661 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNRPA1P09661 MIR449A-201ENST00000362113 91 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 Y_RNA.148-201ENST00000363557 117 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 MIR517A-201ENST00000385001 87 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AL138878.1-201ENST00000405131 347 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AL592148.1-201ENST00000413568 445 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AC113618.1-201ENST00000416747 285 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 RPS15AP6-201ENST00000420703 385 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AC063976.3-201ENST00000426849 329 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 SSXP4-201ENST00000451349 245 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AL109933.2-201ENST00000452651 260 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 SNORD5.1-201ENST00000458800 75 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AC018437.1-201ENST00000492214 406 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 RNU6-120P-201ENST00000516077 103 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 RNU6-976P-201ENST00000516086 111 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 RNA5SP384-201ENST00000516615 116 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 RN7SKP295-201ENST00000517264 153 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.66□□□□□ -1.82
SNRPA1P09661 HMGB1P14-201ENST00000557424 591 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AC011494.1-201ENST00000596454 237 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.66□□□□□ -1.82
SNRPA1P09661 RMST_4.1-201ENST00000616886 107 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SNRPA1P09661 MTND5P30-201ENST00000452896 1731 ntBASIC3.66□□□□□ -1.82
SNRPA1P09661 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.66□□□□□ -1.82
SNRPA1P09661 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 265.6 ms