Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC092451.2-201ENST00000538746 658 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.12□□□□□ -2.23
HLA-DQB2P05538 CR383656.8-201ENST00000549046 145 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 MIR4498-201ENST00000577599 66 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC012065.4-201ENST00000602445 679 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AL359821.1-201ENST00000605519 182 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC130324.3-201ENST00000614165 542 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HLA-DQB2P05538 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DQB2P05538 Y_RNA.99-201ENST00000363138 105 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 RNU6-1210P-201ENST00000363775 107 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 RNU6-395P-201ENST00000365662 106 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 AL136310.1-201ENST00000404926 654 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 RNU2-41P-201ENST00000410991 178 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.11□□□□□ -2.23
HLA-DQB2P05538 OR6C66P-201ENST00000414917 930 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 AL365338.1-201ENST00000422282 858 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.11□□□□□ -2.23
HLA-DQB2P05538 AL583843.1-201ENST00000456070 346 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 AL139824.2-201ENST00000458731 1095 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 SNORD97-201ENST00000459187 142 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 SNORA19.3-201ENST00000516165 130 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 RNU6-677P-201ENST00000516914 101 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.11□□□□□ -2.23
HLA-DQB2P05538 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.11□□□□□ -2.23
HLA-DQB2P05538 MIR544B-201ENST00000582372 78 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 AC080078.3-201ENST00000605407 463 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 AC112220.3-201ENST00000605502 502 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 RNU6-88P-201ENST00000606801 100 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 PART1_2.1-201ENST00000612397 250 ntBASIC1.11□□□□□ -2.23
HLA-DQB2P05538 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DQB2P05538 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 RNU6-511P-201ENST00000363496 107 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 SNORD116.1-201ENST00000365628 92 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 RNU2-23P-201ENST00000410545 195 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AC092809.3-201ENST00000415453 231 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AC009518.2-201ENST00000418056 731 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AL354941.1-201ENST00000438600 464 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AL353752.1-201ENST00000454946 260 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 KC877982.1-201ENST00000602313 470 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AL022154.1-201ENST00000604698 785 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 MIR15A-201ENST00000607334 83 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 AC072039.2-201ENST00000608883 439 ntBASIC1.1□□□□□ -2.23
HLA-DQB2P05538 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQB2P05538 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 RNU6-72P-201ENST00000384285 79 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AL035666.1-201ENST00000446195 348 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 PTENP1-201ENST00000447117 1215 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC112492.4-201ENST00000456549 352 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 snoU109.2-201ENST00000459316 135 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 RPL30P6-201ENST00000475925 342 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 MTCYBP40-201ENST00000509390 1135 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC093259.1-201ENST00000509755 300 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC010587.2-201ENST00000511727 448 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 RNU6-276P-201ENST00000516114 96 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC174048.1-201ENST00000603389 144 ntBASIC1.09□□□□□ -2.23
HLA-DQB2P05538 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-DQB2P05538 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 ZNF29P-201ENST00000225587 168 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 RNU6-433P-201ENST00000363216 104 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 RNU5E-6P-201ENST00000365574 115 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 SNORD26-201ENST00000384147 75 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.465-201ENST00000384293 102 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 MIR29B2-201ENST00000385055 81 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 MIR513A1-201ENST00000385138 129 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.623-201ENST00000411128 95 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 RPL23AP36-201ENST00000413895 458 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 ELOCP17-201ENST00000414751 326 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 ELOCP9-201ENST00000418624 239 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 RPS15AP12-201ENST00000419498 388 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AL365400.1-201ENST00000431854 640 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC092473.1-201ENST00000441098 221 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC093899.1-201ENST00000457984 376 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 RPL30P12-201ENST00000474666 353 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC010409.1-201ENST00000487382 476 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC005840.1-201ENST00000498412 377 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC119751.4-201ENST00000507498 357 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC108729.3-201ENST00000513484 108 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 RNU6-1092P-201ENST00000516955 87 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms