Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR320B2-201ENST00000408479 138 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 RNA5SP104-201ENST00000410989 118 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFAP04085 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFAP04085 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFAP04085 RNU6-625P-201ENST00000459412 107 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 AC007215.1-201ENST00000464893 276 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 AC109925.1-201ENST00000478069 331 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 AC015795.1-201ENST00000513669 327 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 RNU6-255P-201ENST00000516957 105 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 MRPL49P2-201ENST00000521066 465 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.25□□□□□ -1.73
PDGFAP04085 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.25□□□□□ -1.73
PDGFAP04085 AC025884.1-201ENST00000556034 378 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 CYP4A27P-201ENST00000567218 190 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 AC105137.2-201ENST00000569073 466 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 AC022441.3-201ENST00000605737 136 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 MIR7154-201ENST00000620673 73 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PDGFAP04085 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFAP04085 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
PDGFAP04085 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFAP04085 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 AC007496.3-201ENST00000624987 3443 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFAP04085 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFAP04085 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
PDGFAP04085 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFAP04085 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFAP04085 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFAP04085 BX322639.1-202ENST00000423987 2213 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFAP04085 RNU6-793P-201ENST00000384233 104 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 MIR93-201ENST00000385024 80 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 HSPE1P26-201ENST00000405341 275 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 RNU6-651P-201ENST00000411040 105 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 PTGES3P4-201ENST00000426243 356 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFAP04085 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFAP04085 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFAP04085 RPL23AP3-201ENST00000453844 468 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 RPL23AP81-201ENST00000455252 467 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 snoU13.28-201ENST00000459235 104 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 RPL32P34-201ENST00000486380 400 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFAP04085 AC034105.4-201ENST00000568304 277 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 MIR3133-201ENST00000583157 78 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 HSPE1P7-201ENST00000604681 321 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFAP04085 AC023043.4-201ENST00000612081 449 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 SNORD98-201ENST00000636377 67 ntBASIC4.24□□□□□ -1.73
PDGFAP04085 RNU1-64P-201ENST00000365443 163 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFAP04085 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PDGFAP04085 RPL19P1-201ENST00000411635 428 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFAP04085 SNRPGP5-201ENST00000456003 220 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 RPL30P14-201ENST00000482744 348 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 RPL21P129-201ENST00000491732 478 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC025445.1-201ENST00000502728 300 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFAP04085 SNORD19.2-201ENST00000516978 73 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC005868.1-201ENST00000536421 331 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC069240.1-201ENST00000548774 375 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC018448.1-201ENST00000552843 316 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 RPL21P9-201ENST00000556149 474 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFAP04085 AC011921.3-201ENST00000605540 361 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 MIR92B-201ENST00000607575 96 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC068831.7-201ENST00000616954 363 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC002076.2-201ENST00000617362 122 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AC073349.3-201ENST00000617616 186 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 AF117829.1-206ENST00000621883 3802 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 RNA5SP196-201ENST00000625967 102 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PDGFAP04085 DHX9P1-201ENST00000436565 3076 ntBASIC4.23□□□□□ -1.73
PDGFAP04085 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PDGFAP04085 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
PDGFAP04085 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFAP04085 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFAP04085 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFAP04085 RNU6-47P-201ENST00000383866 107 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 Y_RNA.498-201ENST00000384460 102 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 RNU6-19P-201ENST00000384718 107 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 RNU2-37P-201ENST00000410695 177 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 CYCSP48-201ENST00000417124 323 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 RPS12P10-201ENST00000427031 377 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFAP04085 AL353748.1-201ENST00000440753 474 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 AL441985.1-201ENST00000457727 251 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 RPS26P28-201ENST00000470806 348 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFAP04085 AIG1P1-201ENST00000503376 148 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 Y_RNA.662-201ENST00000516028 97 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms