Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-451P-201ENST00000362921 107 ntBASIC2.54□□□□□ -2
VTNP04004 RNU6-1303P-201ENST00000364841 107 ntBASIC2.54□□□□□ -2
VTNP04004 Y_RNA.373-201ENST00000365600 103 ntBASIC2.54□□□□□ -2
VTNP04004 RNU4-20P-201ENST00000365601 151 ntBASIC2.54□□□□□ -2
VTNP04004 RNU6-38P-201ENST00000384085 107 ntBASIC2.54□□□□□ -2
VTNP04004 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.54□□□□□ -2
VTNP04004 RNA5SP219-201ENST00000390940 113 ntBASIC2.54□□□□□ -2
VTNP04004 RNU6-332P-201ENST00000391193 108 ntBASIC2.54□□□□□ -2
VTNP04004 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
VTNP04004 RPL26P27-201ENST00000414397 437 ntBASIC2.54□□□□□ -2
VTNP04004 PGBD4P6-201ENST00000421501 610 ntBASIC2.54□□□□□ -2
VTNP04004 AC098614.2-201ENST00000426040 255 ntBASIC2.54□□□□□ -2
VTNP04004 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.54□□□□□ -2
VTNP04004 AL669831.1-202ENST00000428504 417 ntBASIC2.54□□□□□ -2
VTNP04004 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.54□□□□□ -2
VTNP04004 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
VTNP04004 GTF2IP13-201ENST00000438487 386 ntBASIC2.54□□□□□ -2
VTNP04004 BRK1P2-201ENST00000442875 223 ntBASIC2.54□□□□□ -2
VTNP04004 AC009296.1-201ENST00000443146 155 ntBASIC2.54□□□□□ -2
VTNP04004 AL078601.1-201ENST00000444542 271 ntBASIC2.54□□□□□ -2
VTNP04004 AC233279.1-201ENST00000455300 423 ntBASIC2.54□□□□□ -2
VTNP04004 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.54□□□□□ -2
VTNP04004 RNU6-333P-201ENST00000459117 107 ntBASIC2.54□□□□□ -2
VTNP04004 snoU109.2-201ENST00000459316 135 ntBASIC2.54□□□□□ -2
VTNP04004 RPL31P41-201ENST00000477967 372 ntBASIC2.54□□□□□ -2
VTNP04004 AC069439.1-201ENST00000494739 167 ntBASIC2.54□□□□□ -2
VTNP04004 CCDC34P1-201ENST00000507441 517 ntBASIC2.54□□□□□ -2
VTNP04004 AC074344.1-201ENST00000512823 224 ntBASIC2.54□□□□□ -2
VTNP04004 RNU6-56P-201ENST00000516986 93 ntBASIC2.54□□□□□ -2
VTNP04004 SNORA31.26-201ENST00000517250 137 ntBASIC2.54□□□□□ -2
VTNP04004 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.54□□□□□ -2
VTNP04004 MIR4648-201ENST00000580107 72 ntBASIC2.54□□□□□ -2
VTNP04004 U2.17-201ENST00000611454 95 ntBASIC2.54□□□□□ -2
VTNP04004 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.54□□□□□ -2
VTNP04004 AP003400.5-201ENST00000624827 617 ntBASIC2.54□□□□□ -2
VTNP04004 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
VTNP04004 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.54□□□□□ -2
VTNP04004 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VTNP04004 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.53□□□□□ -2
VTNP04004 ADAM3A-203ENST00000461344 2157 ntBASIC2.53□□□□□ -2
VTNP04004 AC093536.2-201ENST00000565257 1406 ntBASIC2.53□□□□□ -2
VTNP04004 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
VTNP04004 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.53□□□□□ -2
VTNP04004 MIR412-201ENST00000362142 91 ntBASIC2.53□□□□□ -2
VTNP04004 SNORA16.2-201ENST00000390991 127 ntBASIC2.53□□□□□ -2
VTNP04004 RNU2-49P-201ENST00000410666 184 ntBASIC2.53□□□□□ -2
VTNP04004 NDUFS5P4-201ENST00000412983 318 ntBASIC2.53□□□□□ -2
VTNP04004 AL513477.1-202ENST00000417061 214 ntBASIC2.53□□□□□ -2
VTNP04004 BPY2DP-201ENST00000422208 265 ntBASIC2.53□□□□□ -2
VTNP04004 DPH3P2-201ENST00000422618 250 ntBASIC2.53□□□□□ -2
VTNP04004 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.53□□□□□ -2
VTNP04004 AC104332.2-201ENST00000429959 156 ntBASIC2.53□□□□□ -2
VTNP04004 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
VTNP04004 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.53□□□□□ -2
VTNP04004 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.53□□□□□ -2
VTNP04004 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.53□□□□□ -2
VTNP04004 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.53□□□□□ -2
VTNP04004 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
VTNP04004 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.53□□□□□ -2
VTNP04004 AC008716.1-201ENST00000511084 513 ntBASIC2.53□□□□□ -2
VTNP04004 AC113155.1-201ENST00000511141 769 ntBASIC2.53□□□□□ -2
VTNP04004 MRPS36P2-201ENST00000512569 299 ntBASIC2.53□□□□□ -2
VTNP04004 RNU6-703P-201ENST00000516946 107 ntBASIC2.53□□□□□ -2
VTNP04004 RNU6-1183P-201ENST00000517054 60 ntBASIC2.53□□□□□ -2
VTNP04004 AL133241.1-201ENST00000556832 487 ntBASIC2.53□□□□□ -2
VTNP04004 AL138976.2-201ENST00000563989 694 ntBASIC2.53□□□□□ -2
VTNP04004 MIR1273D-201ENST00000577266 86 ntBASIC2.53□□□□□ -2
VTNP04004 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.53□□□□□ -2
VTNP04004 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
VTNP04004 Z82243.1-201ENST00000609432 473 ntBASIC2.53□□□□□ -2
VTNP04004 RMST_3.1-201ENST00000611651 109 ntBASIC2.53□□□□□ -2
VTNP04004 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
VTNP04004 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
VTNP04004 AL031601.2-202ENST00000622650 282 ntBASIC2.53□□□□□ -2
VTNP04004 AC100810.6-201ENST00000638068 285 ntBASIC2.53□□□□□ -2
VTNP04004 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
VTNP04004 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VTNP04004 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.52□□□□□ -2.01
VTNP04004 RNU1-51P-201ENST00000365345 176 ntBASIC2.52□□□□□ -2.01
VTNP04004 Y_RNA.378-201ENST00000365652 113 ntBASIC2.52□□□□□ -2.01
VTNP04004 RNU6-166P-201ENST00000384371 107 ntBASIC2.52□□□□□ -2.01
VTNP04004 MIR10A-201ENST00000385043 110 ntBASIC2.52□□□□□ -2.01
VTNP04004 SNORA40C-201ENST00000391285 128 ntBASIC2.52□□□□□ -2.01
VTNP04004 Y_RNA.615-201ENST00000410769 117 ntBASIC2.52□□□□□ -2.01
VTNP04004 Y_RNA.623-201ENST00000411128 95 ntBASIC2.52□□□□□ -2.01
VTNP04004 BX682237.1-201ENST00000415016 335 ntBASIC2.52□□□□□ -2.01
VTNP04004 HMGB1P9-201ENST00000429856 646 ntBASIC2.52□□□□□ -2.01
VTNP04004 MTND1P2-201ENST00000430604 821 ntBASIC2.52□□□□□ -2.01
VTNP04004 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VTNP04004 CALM1P1-201ENST00000442082 433 ntBASIC2.52□□□□□ -2.01
VTNP04004 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.52□□□□□ -2.01
VTNP04004 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.52□□□□□ -2.01
VTNP04004 AC008571.1-201ENST00000467232 300 ntBASIC2.52□□□□□ -2.01
VTNP04004 RPS26P21-201ENST00000475397 348 ntBASIC2.52□□□□□ -2.01
VTNP04004 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.52□□□□□ -2.01
VTNP04004 HMGB1P30-201ENST00000492455 606 ntBASIC2.52□□□□□ -2.01
VTNP04004 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.52□□□□□ -2.01
VTNP04004 RNU2-69P-201ENST00000516061 100 ntBASIC2.52□□□□□ -2.01
VTNP04004 NACAP3-201ENST00000552100 481 ntBASIC2.52□□□□□ -2.01
VTNP04004 AL118558.2-201ENST00000556294 238 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms