Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.15□□□□□ -2.23
APOEP02649 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.15□□□□□ -2.23
APOEP02649 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.15□□□□□ -2.23
APOEP02649 AL365400.1-201ENST00000431854 640 ntBASIC1.15□□□□□ -2.23
APOEP02649 MTCO3P5-201ENST00000433620 714 ntBASIC1.15□□□□□ -2.23
APOEP02649 AL135790.2-201ENST00000437701 267 ntBASIC1.15□□□□□ -2.23
APOEP02649 AL035666.1-201ENST00000446195 348 ntBASIC1.15□□□□□ -2.23
APOEP02649 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.15□□□□□ -2.23
APOEP02649 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
APOEP02649 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
APOEP02649 AC108729.1-201ENST00000487812 947 ntBASIC1.15□□□□□ -2.23
APOEP02649 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.15□□□□□ -2.23
APOEP02649 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.15□□□□□ -2.23
APOEP02649 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.15□□□□□ -2.23
APOEP02649 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
APOEP02649 RN7SKP256-201ENST00000517201 314 ntBASIC1.15□□□□□ -2.23
APOEP02649 RNU6-902P-201ENST00000517212 91 ntBASIC1.15□□□□□ -2.23
APOEP02649 AC018630.3-201ENST00000542637 96 ntBASIC1.15□□□□□ -2.23
APOEP02649 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.15□□□□□ -2.23
APOEP02649 AC092140.2-201ENST00000618027 521 ntBASIC1.15□□□□□ -2.23
APOEP02649 MTND5P42-201ENST00000637720 498 ntBASIC1.15□□□□□ -2.23
APOEP02649 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
APOEP02649 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
APOEP02649 Y_RNA.4-201ENST00000362333 112 ntBASIC1.14□□□□□ -2.23
APOEP02649 RNA5SP493-201ENST00000364115 91 ntBASIC1.14□□□□□ -2.23
APOEP02649 SNORA62.1-201ENST00000364287 154 ntBASIC1.14□□□□□ -2.23
APOEP02649 RNU6-622P-201ENST00000384272 103 ntBASIC1.14□□□□□ -2.23
APOEP02649 CBX3P9-201ENST00000402326 552 ntBASIC1.14□□□□□ -2.23
APOEP02649 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.14□□□□□ -2.23
APOEP02649 SNRPEP10-201ENST00000420249 274 ntBASIC1.14□□□□□ -2.23
APOEP02649 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
APOEP02649 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.14□□□□□ -2.23
APOEP02649 AL591704.1-201ENST00000432574 275 ntBASIC1.14□□□□□ -2.23
APOEP02649 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
APOEP02649 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.14□□□□□ -2.23
APOEP02649 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
APOEP02649 AL583843.1-201ENST00000456070 346 ntBASIC1.14□□□□□ -2.23
APOEP02649 RNU6-953P-201ENST00000459154 107 ntBASIC1.14□□□□□ -2.23
APOEP02649 snoU109.2-201ENST00000459316 135 ntBASIC1.14□□□□□ -2.23
APOEP02649 MTND1P16-201ENST00000465177 898 ntBASIC1.14□□□□□ -2.23
APOEP02649 AP001025.1-201ENST00000486139 332 ntBASIC1.14□□□□□ -2.23
APOEP02649 RPL30P1-201ENST00000488676 339 ntBASIC1.14□□□□□ -2.23
APOEP02649 HMGN1P7-201ENST00000491722 313 ntBASIC1.14□□□□□ -2.23
APOEP02649 RNU6-914P-201ENST00000516749 109 ntBASIC1.14□□□□□ -2.23
APOEP02649 AL157871.3-201ENST00000557231 293 ntBASIC1.14□□□□□ -2.23
APOEP02649 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
APOEP02649 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.14□□□□□ -2.23
APOEP02649 SUB1P4-201ENST00000566062 339 ntBASIC1.14□□□□□ -2.23
APOEP02649 MIR3169-201ENST00000578032 83 ntBASIC1.14□□□□□ -2.23
APOEP02649 BNIP3P26-201ENST00000600827 554 ntBASIC1.14□□□□□ -2.23
APOEP02649 AP000860.1-201ENST00000605250 559 ntBASIC1.14□□□□□ -2.23
APOEP02649 AC097468.3-201ENST00000607956 456 ntBASIC1.14□□□□□ -2.23
APOEP02649 AC131235.4-201ENST00000609288 620 ntBASIC1.14□□□□□ -2.23
APOEP02649 AC130324.3-201ENST00000614165 542 ntBASIC1.14□□□□□ -2.23
APOEP02649 AL590240.4-201ENST00000616908 390 ntBASIC1.14□□□□□ -2.23
APOEP02649 Y_RNA.33-201ENST00000362591 102 ntBASIC1.13□□□□□ -2.23
APOEP02649 RNU5A-8P-201ENST00000364102 114 ntBASIC1.13□□□□□ -2.23
APOEP02649 Y_RNA.311-201ENST00000365068 96 ntBASIC1.13□□□□□ -2.23
APOEP02649 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.13□□□□□ -2.23
APOEP02649 OR6C66P-201ENST00000414917 930 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC009518.2-201ENST00000418056 731 ntBASIC1.13□□□□□ -2.23
APOEP02649 USP9YP11-201ENST00000427537 717 ntBASIC1.13□□□□□ -2.23
APOEP02649 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.13□□□□□ -2.23
APOEP02649 AL591212.2-201ENST00000433923 257 ntBASIC1.13□□□□□ -2.23
APOEP02649 AL117351.1-201ENST00000438864 766 ntBASIC1.13□□□□□ -2.23
APOEP02649 MTCO1P44-201ENST00000441935 243 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC112492.4-201ENST00000456549 352 ntBASIC1.13□□□□□ -2.23
APOEP02649 COX6CP14-201ENST00000469580 174 ntBASIC1.13□□□□□ -2.23
APOEP02649 RPS26P55-201ENST00000471178 356 ntBASIC1.13□□□□□ -2.23
APOEP02649 HMGB1P30-201ENST00000492455 606 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC021146.8-201ENST00000507455 733 ntBASIC1.13□□□□□ -2.23
APOEP02649 AP000907.2-201ENST00000530827 353 ntBASIC1.13□□□□□ -2.23
APOEP02649 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.13□□□□□ -2.23
APOEP02649 AC005668.1-201ENST00000571142 476 ntBASIC1.13□□□□□ -2.23
APOEP02649 SNORA77B-201ENST00000578179 125 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.13□□□□□ -2.23
APOEP02649 AC080078.3-201ENST00000605407 463 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC022893.3-201ENST00000607665 437 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC063943.3-201ENST00000615562 356 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC123767.1-202ENST00000620407 817 ntBASIC1.13□□□□□ -2.23
APOEP02649 AC233981.2-201ENST00000611524 1614 ntBASIC1.13□□□□□ -2.23
APOEP02649 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
APOEP02649 RNU6-212P-201ENST00000362642 104 ntBASIC1.12□□□□□ -2.23
APOEP02649 Y_RNA.164-201ENST00000363709 102 ntBASIC1.12□□□□□ -2.23
APOEP02649 SNORD114-6-201ENST00000364393 72 ntBASIC1.12□□□□□ -2.23
APOEP02649 SNORD14B-201ENST00000364533 90 ntBASIC1.12□□□□□ -2.23
APOEP02649 RNU6-621P-201ENST00000364752 109 ntBASIC1.12□□□□□ -2.23
APOEP02649 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
APOEP02649 RPS27P16-201ENST00000425758 201 ntBASIC1.12□□□□□ -2.23
APOEP02649 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.12□□□□□ -2.23
APOEP02649 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.12□□□□□ -2.23
APOEP02649 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
APOEP02649 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.12□□□□□ -2.23
APOEP02649 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.12□□□□□ -2.23
APOEP02649 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.12□□□□□ -2.23
APOEP02649 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.12□□□□□ -2.23
APOEP02649 SUMO2P5-201ENST00000506790 245 ntBASIC1.12□□□□□ -2.23
APOEP02649 RPL21P5-201ENST00000554662 472 ntBASIC1.12□□□□□ -2.23
APOEP02649 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.12□□□□□ -2.23
APOEP02649 MIR1273C-201ENST00000578669 77 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms