Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU6-1069P-201ENST00000516612 133 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 RNU6-347P-201ENST00000516658 105 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 RNU6-798P-201ENST00000516912 103 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 RNU6-64P-201ENST00000517119 105 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 HMGN1P28-201ENST00000521340 364 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 MIR5692C1-201ENST00000585309 91 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 AL138889.2-201ENST00000603883 242 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 AL021879.1-201ENST00000611756 288 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
COL3A1P02461 EXOC5P1-201ENST00000510543 1969 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
COL3A1P02461 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.42□□□□□ -1.86
COL3A1P02461 RNA5SP68-201ENST00000363885 119 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 RNU6-266P-201ENST00000364225 107 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 RNU1-100P-201ENST00000365255 165 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 Y_RNA.399-201ENST00000383955 105 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 RNU6-432P-201ENST00000384196 109 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 Y_RNA.512-201ENST00000384518 102 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 RNU6-713P-201ENST00000384761 107 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 SNORD70.1-201ENST00000391007 85 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.42□□□□□ -1.86
COL3A1P02461 BMS1P22-201ENST00000414726 313 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 BX682237.1-201ENST00000415016 335 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 PGBD4P6-201ENST00000421501 610 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AC099799.1-201ENST00000439809 192 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.42□□□□□ -1.86
COL3A1P02461 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL3A1P02461 HMGB3P30-201ENST00000457863 606 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 DYNLL1P5-201ENST00000467158 270 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AC104472.2-201ENST00000469035 601 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.42□□□□□ -1.86
COL3A1P02461 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.42□□□□□ -1.86
COL3A1P02461 AC108078.2-201ENST00000510750 236 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 RNA5SP148-201ENST00000516527 94 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 RNU6-1332P-201ENST00000516666 104 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 RNU6-789P-201ENST00000517105 102 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.42□□□□□ -1.86
COL3A1P02461 AC026371.1-201ENST00000551867 419 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.42□□□□□ -1.86
COL3A1P02461 HSBP1P1-201ENST00000555205 166 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AC016727.2-201ENST00000603988 621 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AC004805.2-201ENST00000605382 482 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AC012443.1-201ENST00000605605 231 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 AC009570.1-201ENST00000609599 745 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.42□□□□□ -1.86
COL3A1P02461 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL3A1P02461 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL3A1P02461 ZNF734P-201ENST00000419494 1534 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL3A1P02461 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.42□□□□□ -1.86
COL3A1P02461 AC092079.1-201ENST00000558620 1985 ntBASIC3.42□□□□□ -1.86
COL3A1P02461 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL3A1P02461 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL3A1P02461 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL3A1P02461 Y_RNA.39-201ENST00000362620 98 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 RNU6-1243P-201ENST00000364028 107 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 Y_RNA.350-201ENST00000365409 98 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 Y_RNA.485-201ENST00000384395 102 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 MIR92A2-201ENST00000385299 75 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 MIR548M-201ENST00000408260 86 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 RNU6-516P-201ENST00000411381 104 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.41□□□□□ -1.86
COL3A1P02461 AC092013.1-201ENST00000438795 332 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC010095.1-201ENST00000443543 144 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC022431.1-201ENST00000450941 438 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 SNORD5.1-201ENST00000458800 75 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.41□□□□□ -1.86
COL3A1P02461 AC068781.1-201ENST00000488231 618 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 TBCAP3-201ENST00000512475 312 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC096725.1-201ENST00000514266 313 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.41□□□□□ -1.86
COL3A1P02461 AC090115.3-201ENST00000553218 849 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AL137100.2-201ENST00000555786 315 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
COL3A1P02461 MIR4435-1-201ENST00000582552 80 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC125232.2-201ENST00000592457 143 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC008162.1-201ENST00000604718 254 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AL670379.4-201ENST00000605279 254 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AL606534.2-204ENST00000635008 178 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 U2.22-201ENST00000636441 106 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL3A1P02461 AC011978.2-201ENST00000569835 2054 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL3A1P02461 Y_RNA.396-201ENST00000383949 103 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 Y_RNA.473-201ENST00000384333 102 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 RNU6-434P-201ENST00000384376 107 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 RNU6-393P-201ENST00000384475 107 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 SNORA41-201ENST00000384675 132 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 RNU6-293P-201ENST00000411259 106 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.41□□□□□ -1.86
COL3A1P02461 AC005094.1-201ENST00000440420 368 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC011816.1-201ENST00000441346 546 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 RNU7-167P-201ENST00000459160 62 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 RNU6-1132P-201ENST00000459214 107 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 UBL5P3-201ENST00000475112 231 ntBASIC3.41□□□□□ -1.86
COL3A1P02461 AC026801.1-201ENST00000497178 464 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms