Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU2-16P-201ENST00000410712 136 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 RNU2-63P-201ENST00000410792 194 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 MTATP6P18-201ENST00000417994 673 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AC097463.2-201ENST00000421074 142 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.38□□□□□ -2.03
PDGFBP01127 EIF4EP4-201ENST00000424916 578 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AC010975.2-201ENST00000427781 588 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.38□□□□□ -2.03
PDGFBP01127 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.38□□□□□ -2.03
PDGFBP01127 RPL7P54-201ENST00000438336 674 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 MTND1P18-201ENST00000448191 573 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.38□□□□□ -2.03
PDGFBP01127 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.38□□□□□ -2.03
PDGFBP01127 RNU7-182P-201ENST00000459009 62 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.38□□□□□ -2.03
PDGFBP01127 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 ELOCP31-201ENST00000540463 467 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AC010297.1-201ENST00000623948 149 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AC138627.2-201ENST00000624202 601 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.38□□□□□ -2.03
PDGFBP01127 SEPT14P19-203ENST00000633205 211 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PDGFBP01127 Z75746.1-201ENST00000440243 2080 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 ZNF680P1-201ENST00000436625 1469 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 AC103710.2-202ENST00000641454 2853 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PDGFBP01127 Y_RNA.41-201ENST00000362646 102 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 Y_RNA.159-201ENST00000363674 87 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 RNA5SP125-201ENST00000364843 120 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 RNA5SP240-201ENST00000365355 128 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 Y_RNA.355-201ENST00000365462 98 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 RNU6-108P-201ENST00000365558 107 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 U8.13-201ENST00000390842 128 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.37□□□□□ -2.03
PDGFBP01127 PGBD4P6-201ENST00000421501 610 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 MTCYBP8-201ENST00000422855 651 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.37□□□□□ -2.03
PDGFBP01127 AC004383.1-201ENST00000438135 289 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 DYNLL1P5-201ENST00000467158 270 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AC107401.1-201ENST00000503426 685 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.37□□□□□ -2.03
PDGFBP01127 FAM92A1P2-202ENST00000504766 877 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AC107222.1-201ENST00000510899 637 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.37□□□□□ -2.03
PDGFBP01127 RNU6-1178P-201ENST00000516674 107 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.37□□□□□ -2.03
PDGFBP01127 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.37□□□□□ -2.03
PDGFBP01127 SNRPGP18-201ENST00000553000 214 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.37□□□□□ -2.03
PDGFBP01127 MIR4775-201ENST00000581168 75 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PDGFBP01127 AC008752.3-201ENST00000588113 712 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.37□□□□□ -2.03
PDGFBP01127 AL391646.1-201ENST00000603860 190 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AP001596.2-201ENST00000608410 312 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 HULC.1-201ENST00000612720 240 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AC011890.2-201ENST00000613393 294 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AL354950.2-201ENST00000617939 290 ntBASIC2.37□□□□□ -2.03
PDGFBP01127 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.37□□□□□ -2.03
PDGFBP01127 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.37□□□□□ -2.03
PDGFBP01127 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.37□□□□□ -2.03
PDGFBP01127 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PDGFBP01127 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDGFBP01127 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.36□□□□□ -2.03
PDGFBP01127 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 SNORA75B-201ENST00000384053 137 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 MIR578-201ENST00000384828 96 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 MIR454-201ENST00000390180 115 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 OR6C66P-201ENST00000414917 930 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.36□□□□□ -2.03
PDGFBP01127 AL353193.1-201ENST00000421444 268 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
PDGFBP01127 AC016691.1-201ENST00000441321 413 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.36□□□□□ -2.03
PDGFBP01127 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.36□□□□□ -2.03
PDGFBP01127 AC007677.1-201ENST00000445757 515 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.36□□□□□ -2.03
PDGFBP01127 CYP2C59P-201ENST00000457790 269 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.36□□□□□ -2.03
PDGFBP01127 AC022493.1-201ENST00000492984 337 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC108078.1-201ENST00000508073 725 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC008526.1-201ENST00000509149 338 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 HSPE1P18-201ENST00000517602 280 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC079598.5-201ENST00000547460 117 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC009127.3-201ENST00000570531 403 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
PDGFBP01127 MTATP6P3-201ENST00000581686 676 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 RPS15AP11-201ENST00000594193 385 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC011494.1-201ENST00000596454 237 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AC012507.3-201ENST00000603556 477 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AL670379.10-201ENST00000604330 253 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 AL670379.9-201ENST00000605428 253 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 NDUFA8P1-201ENST00000605525 367 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.36□□□□□ -2.03
PDGFBP01127 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDGFBP01127 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PDGFBP01127 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDGFBP01127 RNU4-48P-201ENST00000365559 182 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms