Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SNORD116-20-201ENST00000384529 92 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 RNU2-29P-201ENST00000410423 189 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.59□□□□□ -1.99
GGPS1O95749 MTCO2P19-201ENST00000427513 598 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
GGPS1O95749 MTND1P29-201ENST00000448112 647 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AC012308.1-201ENST00000451232 178 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 MTCO2P18-201ENST00000457151 658 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AC117503.1-201ENST00000472241 394 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AP000852.1-201ENST00000472460 573 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.59□□□□□ -1.99
GGPS1O95749 MTCO3P9-201ENST00000506989 781 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AC108078.1-201ENST00000508073 725 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.59□□□□□ -1.99
GGPS1O95749 LRRC34P2-201ENST00000514850 553 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
GGPS1O95749 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.59□□□□□ -1.99
GGPS1O95749 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.59□□□□□ -1.99
GGPS1O95749 MIR4446-201ENST00000578505 67 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
GGPS1O95749 AL137847.3-201ENST00000611521 109 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 AC104237.2-201ENST00000612456 443 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 RMST_7.1-201ENST00000621935 268 ntBASIC2.59□□□□□ -1.99
GGPS1O95749 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -2
GGPS1O95749 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.58□□□□□ -2
GGPS1O95749 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
GGPS1O95749 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
GGPS1O95749 RNU6-1010P-201ENST00000362757 107 ntBASIC2.58□□□□□ -2
GGPS1O95749 SNORA38-201ENST00000363946 132 ntBASIC2.58□□□□□ -2
GGPS1O95749 RNU6-622P-201ENST00000384272 103 ntBASIC2.58□□□□□ -2
GGPS1O95749 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.58□□□□□ -2
GGPS1O95749 EIF4EP4-201ENST00000424916 578 ntBASIC2.58□□□□□ -2
GGPS1O95749 AC018634.1-201ENST00000437554 401 ntBASIC2.58□□□□□ -2
GGPS1O95749 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.58□□□□□ -2
GGPS1O95749 snoU13.26-201ENST00000459452 105 ntBASIC2.58□□□□□ -2
GGPS1O95749 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.58□□□□□ -2
GGPS1O95749 RN7SKP219-201ENST00000516825 296 ntBASIC2.58□□□□□ -2
GGPS1O95749 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
GGPS1O95749 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.58□□□□□ -2
GGPS1O95749 BNIP3P6-201ENST00000549284 499 ntBASIC2.58□□□□□ -2
GGPS1O95749 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
GGPS1O95749 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.58□□□□□ -2
GGPS1O95749 AC008752.3-201ENST00000588113 712 ntBASIC2.58□□□□□ -2
GGPS1O95749 AC093788.1-201ENST00000609356 927 ntBASIC2.58□□□□□ -2
GGPS1O95749 AC009233.1-201ENST00000616477 371 ntBASIC2.58□□□□□ -2
GGPS1O95749 AL031601.2-202ENST00000622650 282 ntBASIC2.58□□□□□ -2
GGPS1O95749 MIR6873-201ENST00000622788 63 ntBASIC2.58□□□□□ -2
GGPS1O95749 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.58□□□□□ -2
GGPS1O95749 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
GGPS1O95749 RNU6-1127P-201ENST00000384580 107 ntBASIC2.57□□□□□ -2
GGPS1O95749 OR9R1P-201ENST00000412200 877 ntBASIC2.57□□□□□ -2
GGPS1O95749 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.57□□□□□ -2
GGPS1O95749 UBE2V1P10-201ENST00000414685 269 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.57□□□□□ -2
GGPS1O95749 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.57□□□□□ -2
GGPS1O95749 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.57□□□□□ -2
GGPS1O95749 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.57□□□□□ -2
GGPS1O95749 AC002486.1-201ENST00000435098 391 ntBASIC2.57□□□□□ -2
GGPS1O95749 HMGB1P31-201ENST00000437242 427 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC096638.1-201ENST00000444678 216 ntBASIC2.57□□□□□ -2
GGPS1O95749 FTH1P25-201ENST00000447665 469 ntBASIC2.57□□□□□ -2
GGPS1O95749 AP001025.1-201ENST00000486139 332 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC093534.1-201ENST00000504977 132 ntBASIC2.57□□□□□ -2
GGPS1O95749 SNORA31.23-201ENST00000517219 133 ntBASIC2.57□□□□□ -2
GGPS1O95749 IGKV3-31-201ENST00000523109 329 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC087241.2-201ENST00000535801 324 ntBASIC2.57□□□□□ -2
GGPS1O95749 AL133241.1-201ENST00000556832 487 ntBASIC2.57□□□□□ -2
GGPS1O95749 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC026464.5-201ENST00000562497 722 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC105137.2-201ENST00000569073 466 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
GGPS1O95749 AC022418.1-201ENST00000624118 445 ntBASIC2.57□□□□□ -2
GGPS1O95749 Z69720.2-201ENST00000624755 279 ntBASIC2.57□□□□□ -2
GGPS1O95749 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
GGPS1O95749 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
GGPS1O95749 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
GGPS1O95749 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.56□□□□□ -2
GGPS1O95749 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
GGPS1O95749 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
GGPS1O95749 Y_RNA.1-201ENST00000352915 104 ntBASIC2.56□□□□□ -2
GGPS1O95749 RNU6-78P-201ENST00000362897 107 ntBASIC2.56□□□□□ -2
GGPS1O95749 RNU6-517P-201ENST00000384362 110 ntBASIC2.56□□□□□ -2
GGPS1O95749 RNU6-393P-201ENST00000384475 107 ntBASIC2.56□□□□□ -2
GGPS1O95749 RNU6-1140P-201ENST00000410517 106 ntBASIC2.56□□□□□ -2
GGPS1O95749 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.56□□□□□ -2
GGPS1O95749 AL451074.3-201ENST00000437709 472 ntBASIC2.56□□□□□ -2
GGPS1O95749 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.56□□□□□ -2
GGPS1O95749 RNU7-63P-201ENST00000459054 62 ntBASIC2.56□□□□□ -2
GGPS1O95749 snoU13.15-201ENST00000459407 104 ntBASIC2.56□□□□□ -2
GGPS1O95749 RPL9P6-201ENST00000492764 598 ntBASIC2.56□□□□□ -2
GGPS1O95749 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.56□□□□□ -2
GGPS1O95749 AF213884.2-201ENST00000510417 903 ntBASIC2.56□□□□□ -2
GGPS1O95749 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.56□□□□□ -2
GGPS1O95749 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
GGPS1O95749 RNU6-405P-201ENST00000516637 110 ntBASIC2.56□□□□□ -2
GGPS1O95749 AC109329.1-201ENST00000518744 317 ntBASIC2.56□□□□□ -2
GGPS1O95749 AGGF1P4-201ENST00000568249 801 ntBASIC2.56□□□□□ -2
GGPS1O95749 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.56□□□□□ -2
GGPS1O95749 MTATP6P3-201ENST00000581686 676 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms