Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR7151-201ENST00000617477 60 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 MIR4727-201ENST00000622232 55 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.65□□□□□ -1.83
CNOT4O95628 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.65□□□□□ -1.83
CNOT4O95628 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNOT4O95628 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CNOT4O95628 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNOT4O95628 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CNOT4O95628 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.65□□□□□ -1.83
CNOT4O95628 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CNOT4O95628 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNOT4O95628 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
CNOT4O95628 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNOT4O95628 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
CNOT4O95628 AC022336.2-201ENST00000568966 2538 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNOT4O95628 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNOT4O95628 Y_RNA.462-201ENST00000384268 102 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 MIR215-201ENST00000384858 110 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CNOT4O95628 RNA5SP252-201ENST00000391131 119 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 MIR190B-201ENST00000401119 79 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 RPL21P65-201ENST00000406094 466 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.64□□□□□ -1.83
CNOT4O95628 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.64□□□□□ -1.83
CNOT4O95628 RPS29P7-201ENST00000439662 171 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
CNOT4O95628 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CNOT4O95628 AL513124.1-201ENST00000450410 614 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AC013470.1-201ENST00000453438 462 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 snoU13.28-201ENST00000459235 104 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 RPL29P14-201ENST00000495837 428 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 Y_RNA.713-201ENST00000517013 96 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AC007458.1-201ENST00000542812 373 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.64□□□□□ -1.83
CNOT4O95628 AL442163.3-201ENST00000554110 156 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AC130289.1-201ENST00000577321 73 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.64□□□□□ -1.83
CNOT4O95628 MIR3944-201ENST00000581277 108 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AL133393.1-201ENST00000603277 287 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AL645944.1-201ENST00000603857 493 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 FTX_2.1-201ENST00000618816 94 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 SNORA50A-202ENST00000629536 136 ntBASIC3.64□□□□□ -1.83
CNOT4O95628 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.64□□□□□ -1.83
CNOT4O95628 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNOT4O95628 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CNOT4O95628 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CNOT4O95628 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CNOT4O95628 AC103988.1-201ENST00000566382 2177 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNOT4O95628 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNOT4O95628 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CNOT4O95628 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.63□□□□□ -1.83
CNOT4O95628 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNOT4O95628 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CNOT4O95628 Y_RNA.29-201ENST00000362570 113 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 snoU2_19.2-201ENST00000363024 80 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 RNU6-280P-201ENST00000364145 104 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 RNA5SP130-201ENST00000364431 114 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 Y_RNA.352-201ENST00000365439 102 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 RNU6-1027P-201ENST00000383998 107 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 RNU2-14P-201ENST00000411053 191 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AC091286.1-201ENST00000431233 461 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AL358472.1-201ENST00000431295 329 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.63□□□□□ -1.83
CNOT4O95628 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.63□□□□□ -1.83
CNOT4O95628 AC087190.1-201ENST00000484462 480 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AC107032.1-201ENST00000485945 480 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AC010469.2-201ENST00000496412 480 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AC025755.1-201ENST00000521306 278 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AC093023.1-201ENST00000547375 507 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AC107016.1-201ENST00000550463 337 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 MIR376A1-201ENST00000616574 68 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 U6.92-201ENST00000636464 89 ntBASIC3.63□□□□□ -1.83
CNOT4O95628 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.63□□□□□ -1.83
CNOT4O95628 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.63□□□□□ -1.83
CNOT4O95628 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CNOT4O95628 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
CNOT4O95628 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.63□□□□□ -1.83
CNOT4O95628 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNOT4O95628 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNOT4O95628 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CNOT4O95628 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.62□□□□□ -1.83
CNOT4O95628 RNU6-428P-201ENST00000362942 107 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 SNORD81.1-201ENST00000363064 77 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RNA5SP387-201ENST00000364226 106 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 Y_RNA.358-201ENST00000365491 99 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 CD24P4-201ENST00000382840 243 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 Y_RNA.439-201ENST00000384119 94 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RNU6-140P-201ENST00000384566 108 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 MIR34A-201ENST00000385130 110 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 SNORA12.2-201ENST00000391040 156 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 SNORA40C-201ENST00000391285 128 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RPL21P75-201ENST00000396599 483 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RPL21P28-201ENST00000401418 483 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.62□□□□□ -1.83
CNOT4O95628 AL590556.1-201ENST00000423231 483 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AC092047.1-201ENST00000424997 240 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 GOT2P5-201ENST00000433995 546 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms