Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC090888.2-201ENST00000559765 1144 ntBASIC1.73□□□□□ -2.13
SNX4O95219 DEFB122-202ENST00000569013 197 ntBASIC1.73□□□□□ -2.13
SNX4O95219 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.73□□□□□ -2.13
SNX4O95219 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.73□□□□□ -2.13
SNX4O95219 AL136363.2-201ENST00000604173 851 ntBASIC1.73□□□□□ -2.13
SNX4O95219 AL359999.1-201ENST00000604513 294 ntBASIC1.73□□□□□ -2.13
SNX4O95219 MIR6715A-201ENST00000615929 79 ntBASIC1.73□□□□□ -2.13
SNX4O95219 AL031667.3-201ENST00000620124 655 ntBASIC1.73□□□□□ -2.13
SNX4O95219 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.73□□□□□ -2.13
SNX4O95219 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNX4O95219 RNU6-661P-201ENST00000362409 107 ntBASIC1.72□□□□□ -2.13
SNX4O95219 RNU6-160P-201ENST00000384591 107 ntBASIC1.72□□□□□ -2.13
SNX4O95219 MIR620-201ENST00000385232 95 ntBASIC1.72□□□□□ -2.13
SNX4O95219 Y_RNA.597-201ENST00000410463 100 ntBASIC1.72□□□□□ -2.13
SNX4O95219 RPS20P15-201ENST00000412792 311 ntBASIC1.72□□□□□ -2.13
SNX4O95219 PGBD4P6-201ENST00000421501 610 ntBASIC1.72□□□□□ -2.13
SNX4O95219 HMGB1P31-201ENST00000437242 427 ntBASIC1.72□□□□□ -2.13
SNX4O95219 AC118469.1-201ENST00000442943 488 ntBASIC1.72□□□□□ -2.13
SNX4O95219 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.72□□□□□ -2.13
SNX4O95219 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX4O95219 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.72□□□□□ -2.13
SNX4O95219 RNU5A-4P-201ENST00000516588 111 ntBASIC1.72□□□□□ -2.13
SNX4O95219 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX4O95219 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX4O95219 MTND4P33-201ENST00000556706 766 ntBASIC1.72□□□□□ -2.13
SNX4O95219 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX4O95219 DEFB131E-202ENST00000602581 683 ntBASIC1.72□□□□□ -2.13
SNX4O95219 AC078795.2-201ENST00000602835 1252 ntBASIC1.72□□□□□ -2.13
SNX4O95219 AC123912.5-201ENST00000605470 343 ntBASIC1.72□□□□□ -2.13
SNX4O95219 AC130454.1-201ENST00000622948 401 ntBASIC1.72□□□□□ -2.13
SNX4O95219 OR4G3P-201ENST00000633500 913 ntBASIC1.72□□□□□ -2.13
SNX4O95219 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.72□□□□□ -2.13
SNX4O95219 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
SNX4O95219 RNU6-23P-201ENST00000363283 107 ntBASIC1.71□□□□□ -2.14
SNX4O95219 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX4O95219 RNU6-338P-201ENST00000383888 105 ntBASIC1.71□□□□□ -2.14
SNX4O95219 CISD1P1-201ENST00000393907 327 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX4O95219 RPL23AP39-201ENST00000415533 405 ntBASIC1.71□□□□□ -2.14
SNX4O95219 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SNX4O95219 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.71□□□□□ -2.14
SNX4O95219 AC119618.1-201ENST00000434191 222 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX4O95219 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX4O95219 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
SNX4O95219 RPL30P12-201ENST00000474666 353 ntBASIC1.71□□□□□ -2.14
SNX4O95219 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX4O95219 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX4O95219 AC116337.1-201ENST00000509680 687 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AC108078.2-201ENST00000510750 236 ntBASIC1.71□□□□□ -2.14
SNX4O95219 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
SNX4O95219 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.71□□□□□ -2.14
SNX4O95219 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.71□□□□□ -2.14
SNX4O95219 ZNF519P3-201ENST00000557158 1032 ntBASIC1.71□□□□□ -2.14
SNX4O95219 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.71□□□□□ -2.14
SNX4O95219 AC091135.1-201ENST00000585943 307 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AC022022.2-201ENST00000602989 360 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AL031281.1-201ENST00000604049 488 ntBASIC1.71□□□□□ -2.14
SNX4O95219 AC026585.1-201ENST00000619582 524 ntBASIC1.71□□□□□ -2.14
SNX4O95219 MIR7843-201ENST00000622274 79 ntBASIC1.71□□□□□ -2.14
SNX4O95219 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SNX4O95219 MIR424-201ENST00000362227 98 ntBASIC1.7□□□□□ -2.14
SNX4O95219 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
SNX4O95219 RNU2-20P-201ENST00000410425 191 ntBASIC1.7□□□□□ -2.14
SNX4O95219 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX4O95219 NCOR1P3-201ENST00000420479 303 ntBASIC1.7□□□□□ -2.14
SNX4O95219 MTND4P20-201ENST00000424125 869 ntBASIC1.7□□□□□ -2.14
SNX4O95219 HMGB1P18-201ENST00000438801 619 ntBASIC1.7□□□□□ -2.14
SNX4O95219 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.7□□□□□ -2.14
SNX4O95219 RNU6-333P-201ENST00000459117 107 ntBASIC1.7□□□□□ -2.14
SNX4O95219 RNU6-123P-201ENST00000516163 102 ntBASIC1.7□□□□□ -2.14
SNX4O95219 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX4O95219 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.7□□□□□ -2.14
SNX4O95219 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.7□□□□□ -2.14
SNX4O95219 SNRPGP19-201ENST00000603826 189 ntBASIC1.7□□□□□ -2.14
SNX4O95219 AP000654.2-201ENST00000605633 586 ntBASIC1.7□□□□□ -2.14
SNX4O95219 AC008993.2-201ENST00000631744 806 ntBASIC1.7□□□□□ -2.14
SNX4O95219 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SNX4O95219 RNU6-384P-201ENST00000364900 104 ntBASIC1.69□□□□□ -2.14
SNX4O95219 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
SNX4O95219 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
SNX4O95219 MIR578-201ENST00000384828 96 ntBASIC1.69□□□□□ -2.14
SNX4O95219 RNA5SP100-201ENST00000410903 110 ntBASIC1.69□□□□□ -2.14
SNX4O95219 RNA5SP59-201ENST00000410922 110 ntBASIC1.69□□□□□ -2.14
SNX4O95219 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX4O95219 RPL7P54-201ENST00000438336 674 ntBASIC1.69□□□□□ -2.14
SNX4O95219 AL354941.1-201ENST00000438600 464 ntBASIC1.69□□□□□ -2.14
SNX4O95219 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.69□□□□□ -2.14
SNX4O95219 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.69□□□□□ -2.14
SNX4O95219 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX4O95219 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.69□□□□□ -2.14
SNX4O95219 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.69□□□□□ -2.14
SNX4O95219 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX4O95219 MIR5697-201ENST00000578045 78 ntBASIC1.69□□□□□ -2.14
SNX4O95219 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX4O95219 MIR5692A1-201ENST00000580523 69 ntBASIC1.69□□□□□ -2.14
SNX4O95219 AC011494.1-201ENST00000596454 237 ntBASIC1.69□□□□□ -2.14
SNX4O95219 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms