Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC083798.1-201ENST00000472671 131 ntBASIC2.64□□□□□ -1.99
BEST1O76090 RPL9P6-201ENST00000492764 598 ntBASIC2.64□□□□□ -1.99
BEST1O76090 AP001893.2-201ENST00000526949 202 ntBASIC2.64□□□□□ -1.99
BEST1O76090 AC023050.3-201ENST00000541142 333 ntBASIC2.64□□□□□ -1.99
BEST1O76090 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.64□□□□□ -1.99
BEST1O76090 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.64□□□□□ -1.99
BEST1O76090 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.64□□□□□ -1.99
BEST1O76090 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
BEST1O76090 AC023043.3-201ENST00000593113 385 ntBASIC2.64□□□□□ -1.99
BEST1O76090 U2.17-201ENST00000611454 95 ntBASIC2.64□□□□□ -1.99
BEST1O76090 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.64□□□□□ -1.99
BEST1O76090 uc_338.15-201ENST00000615470 191 ntBASIC2.64□□□□□ -1.99
BEST1O76090 uc_338.34-201ENST00000617467 174 ntBASIC2.64□□□□□ -1.99
BEST1O76090 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BEST1O76090 AP003400.5-201ENST00000624827 617 ntBASIC2.64□□□□□ -1.99
BEST1O76090 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
BEST1O76090 AL354685.2-201ENST00000448218 1447 ntBASIC2.64□□□□□ -1.99
BEST1O76090 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
BEST1O76090 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
BEST1O76090 RNU6-1085P-201ENST00000363576 107 ntBASIC2.63□□□□□ -1.99
BEST1O76090 RNA5SP240-201ENST00000365355 128 ntBASIC2.63□□□□□ -1.99
BEST1O76090 Y_RNA.436-201ENST00000384097 102 ntBASIC2.63□□□□□ -1.99
BEST1O76090 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.63□□□□□ -1.99
BEST1O76090 MTCO3P41-201ENST00000414801 328 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AC016907.1-201ENST00000419483 435 ntBASIC2.63□□□□□ -1.99
BEST1O76090 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.63□□□□□ -1.99
BEST1O76090 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.63□□□□□ -1.99
BEST1O76090 AC073901.1-201ENST00000462471 408 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AC140059.1-201ENST00000489238 361 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.63□□□□□ -1.99
BEST1O76090 AF213884.2-201ENST00000510417 903 ntBASIC2.63□□□□□ -1.99
BEST1O76090 SNORA25.17-201ENST00000517184 124 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AC069113.1-201ENST00000517763 267 ntBASIC2.63□□□□□ -1.99
BEST1O76090 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
BEST1O76090 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.63□□□□□ -1.99
BEST1O76090 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.63□□□□□ -1.99
BEST1O76090 AL136363.2-201ENST00000604173 851 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AL138963.2-201ENST00000605137 226 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AC093783.1-201ENST00000612976 329 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AC009233.1-201ENST00000616477 371 ntBASIC2.63□□□□□ -1.99
BEST1O76090 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
BEST1O76090 AC007792.1-201ENST00000623023 402 ntBASIC2.63□□□□□ -1.99
BEST1O76090 IGHVIII-44-202ENST00000636235 289 ntBASIC2.63□□□□□ -1.99
BEST1O76090 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.63□□□□□ -1.99
BEST1O76090 RNU6-37P-201ENST00000362692 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 SNORD56.1-201ENST00000362913 68 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU1-72P-201ENST00000362976 153 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-11P-201ENST00000364234 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-25P-201ENST00000383873 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-1-201ENST00000383898 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-48P-201ENST00000384161 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-36P-201ENST00000384172 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-4P-201ENST00000384205 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-5P-201ENST00000384238 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-3P-201ENST00000384314 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-16P-201ENST00000384385 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-15P-201ENST00000384534 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-2-201ENST00000384627 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-29P-201ENST00000384637 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-9-201ENST00000384776 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-33P-201ENST00000384793 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 MIR186-201ENST00000384988 86 ntBASIC2.62□□□□□ -1.99
BEST1O76090 AL606923.1-201ENST00000406616 190 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU2-23P-201ENST00000410545 195 ntBASIC2.62□□□□□ -1.99
BEST1O76090 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BEST1O76090 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.62□□□□□ -1.99
BEST1O76090 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST1O76090 RPL7P54-201ENST00000438336 674 ntBASIC2.62□□□□□ -1.99
BEST1O76090 MTND1P1-201ENST00000445453 368 ntBASIC2.62□□□□□ -1.99
BEST1O76090 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
BEST1O76090 MTCO2P7-201ENST00000446518 666 ntBASIC2.62□□□□□ -1.99
BEST1O76090 FDX1P2-201ENST00000450769 375 ntBASIC2.62□□□□□ -1.99
BEST1O76090 DYNLL1P5-201ENST00000467158 270 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RPL23AP45-201ENST00000476406 468 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RPL23AP49-201ENST00000492925 468 ntBASIC2.62□□□□□ -1.99
BEST1O76090 CKS1BP2-201ENST00000497342 240 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RPL37P25-201ENST00000507308 276 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-377P-201ENST00000515965 102 ntBASIC2.62□□□□□ -1.99
BEST1O76090 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST1O76090 AP005902.1-201ENST00000521358 186 ntBASIC2.62□□□□□ -1.99
BEST1O76090 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST1O76090 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.62□□□□□ -1.99
BEST1O76090 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST1O76090 AC007621.1-201ENST00000604544 437 ntBASIC2.62□□□□□ -1.99
BEST1O76090 RNU6-6P-201ENST00000606623 107 ntBASIC2.62□□□□□ -1.99
BEST1O76090 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST1O76090 AL359880.1-201ENST00000621879 266 ntBASIC2.62□□□□□ -1.99
BEST1O76090 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST1O76090 AC002543.1-201ENST00000299783 1954 ntBASIC2.61□□□□□ -1.99
BEST1O76090 AC069528.2-201ENST00000624849 1991 ntBASIC2.61□□□□□ -1.99
BEST1O76090 AC007336.1-201ENST00000576365 3828 ntBASIC2.61□□□□□ -1.99
BEST1O76090 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BEST1O76090 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
BEST1O76090 RNU6-529P-201ENST00000363383 104 ntBASIC2.61□□□□□ -1.99
BEST1O76090 RNU6-527P-201ENST00000363425 104 ntBASIC2.61□□□□□ -1.99
BEST1O76090 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
BEST1O76090 Y_RNA.381-201ENST00000365666 102 ntBASIC2.61□□□□□ -1.99
BEST1O76090 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
BEST1O76090 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.61□□□□□ -1.99
BEST1O76090 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms