Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR29B2-201ENST00000385055 81 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 SRIP3-201ENST00000413200 219 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 BTF3L4P1-201ENST00000413813 468 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 VN1R36P-201ENST00000414936 291 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 TOMM20P4-201ENST00000427861 435 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 MED13P1-201ENST00000428342 171 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 RPS15AP10-201ENST00000432472 382 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1BO75841 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK1BO75841 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1BO75841 MTND3P25-201ENST00000509243 135 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AC093259.1-201ENST00000509755 300 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AC009646.1-201ENST00000510455 318 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1BO75841 CBX3P4-201ENST00000538909 354 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK1BO75841 AC008751.2-201ENST00000597885 980 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AL353778.1-201ENST00000603149 408 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AC138749.5-201ENST00000611461 208 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.4□□□□□ -2.19
UPK1BO75841 AC116165.2-201ENST00000616705 206 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AL159153.1-201ENST00000619688 317 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AC009878.1-201ENST00000621819 340 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 RMST_7.1-201ENST00000621935 268 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 AC097372.5-201ENST00000623665 376 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
UPK1BO75841 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
UPK1BO75841 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
UPK1BO75841 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UPK1BO75841 RNU6-78P-201ENST00000362897 107 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 RNU6-1214P-201ENST00000363650 109 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 RNU5E-5P-201ENST00000365379 116 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 MIR483-201ENST00000385070 76 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 SNORA11-201ENST00000408789 128 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 RN7SKP32-201ENST00000410167 303 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 RN7SKP101-201ENST00000411376 320 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK1BO75841 UBE2V1P4-201ENST00000425374 344 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AL356583.2-201ENST00000426536 280 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.39□□□□□ -2.19
UPK1BO75841 KATNBL1P3-201ENST00000443475 909 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AL357134.1-201ENST00000445848 426 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 RPL39P29-201ENST00000447779 157 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AC006026.2-201ENST00000457376 180 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1BO75841 RPL30P1-201ENST00000488676 339 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1BO75841 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1BO75841 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1BO75841 MRPS36P3-201ENST00000519284 130 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AC022616.3-201ENST00000523940 148 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK1BO75841 AC018630.3-201ENST00000542637 96 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.39□□□□□ -2.19
UPK1BO75841 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1BO75841 AC074050.1-201ENST00000563247 211 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 BNIP3P39-201ENST00000601077 554 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AL121992.2-201ENST00000606262 256 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AC016597.2-201ENST00000613256 341 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.39□□□□□ -2.19
UPK1BO75841 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK1BO75841 AL356292.1-201ENST00000283110 373 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 U3.12-201ENST00000364498 214 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AC019129.1-201ENST00000403786 261 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 SNORA11.1-201ENST00000408133 129 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 RN7SKP284-201ENST00000411002 343 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 Z92545.1-201ENST00000411782 234 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK1BO75841 AC011233.1-201ENST00000422812 283 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 EIF4EP2-201ENST00000422816 654 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AL593851.1-201ENST00000426171 157 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK1BO75841 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 USP9YP12-201ENST00000450481 570 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AC023790.1-201ENST00000482174 347 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK1BO75841 MTCYBP40-201ENST00000509390 1135 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK1BO75841 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.38□□□□□ -2.19
UPK1BO75841 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK1BO75841 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK1BO75841 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK1BO75841 AC073539.2-201ENST00000597113 165 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 CYP2C61P-201ENST00000604072 290 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AC112191.3-201ENST00000604371 277 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AP000240.1-201ENST00000609910 452 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AC131159.1-201ENST00000621854 213 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 AC099654.13-201ENST00000639774 207 ntBASIC1.38□□□□□ -2.19
UPK1BO75841 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK1BO75841 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
UPK1BO75841 MIR126-201ENST00000362291 85 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 RNU1-62P-201ENST00000362599 164 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
UPK1BO75841 MIR544A-201ENST00000384855 91 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 MIR9-3-201ENST00000385084 90 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 RPL23AP32-201ENST00000395315 459 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms