Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
VPS4BO75351 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS4BO75351 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
VPS4BO75351 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS4BO75351 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
VPS4BO75351 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 RNU6-884P-201ENST00000363889 107 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 Y_RNA.252-201ENST00000364556 101 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 U8.8-201ENST00000365399 135 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 RNU6-827P-201ENST00000365553 106 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 RNU6-738P-201ENST00000384531 106 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 SNORA48.5-201ENST00000391143 135 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 U3.37-201ENST00000408528 213 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AC243428.1-201ENST00000421099 264 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS4BO75351 CYCSP4-201ENST00000429682 331 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 RPS15AP10-201ENST00000432472 382 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS4BO75351 MTND4P19-201ENST00000446659 478 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AL590664.1-201ENST00000448065 339 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 RPL37P4-201ENST00000448908 268 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS4BO75351 AC018437.1-201ENST00000492214 406 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS4BO75351 RNU6-470P-201ENST00000515954 104 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS4BO75351 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS4BO75351 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS4BO75351 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS4BO75351 VN1R107P-201ENST00000601784 209 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AC009314.1-201ENST00000603871 304 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS4BO75351 MIR6076-201ENST00000617521 113 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 MIR8057-201ENST00000620957 69 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AC092608.2-201ENST00000624427 218 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS4BO75351 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS4BO75351 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS4BO75351 AC004944.1-201ENST00000517807 3059 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.35□□□□□ -1.87
VPS4BO75351 AC007256.1-201ENST00000392253 2765 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS4BO75351 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS4BO75351 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS4BO75351 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS4BO75351 RNU6-942P-201ENST00000363002 107 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 RNU1-33P-201ENST00000364249 162 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 SNORA63C-201ENST00000364578 129 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 SNORA22B-201ENST00000383876 138 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VPS4BO75351 RNU6-1106P-201ENST00000390845 107 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC126124.2-201ENST00000413542 321 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC099548.1-201ENST00000421443 426 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC011816.1-201ENST00000441346 546 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC115115.1-201ENST00000449927 248 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 SSXP4-201ENST00000451349 245 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC008571.1-201ENST00000467232 300 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 UBE2DNL-203ENST00000474922 222 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 RPS27AP10-201ENST00000496103 208 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS4BO75351 SCARNA16.2-201ENST00000516520 172 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 RNU6-307P-201ENST00000516743 106 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS4BO75351 AC005476.1-201ENST00000554427 397 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 MTCO3P13-201ENST00000577757 781 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS4BO75351 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS4BO75351 AC024153.1-201ENST00000603103 365 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC006557.5-201ENST00000603126 811 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AL360085.1-201ENST00000604713 532 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AL138880.2-201ENST00000616214 239 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 AC073476.4-201ENST00000628409 72 ntBASIC3.34□□□□□ -1.87
VPS4BO75351 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS4BO75351 CDC27P3-201ENST00000635418 1910 ntBASIC3.34□□□□□ -1.88
VPS4BO75351 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS4BO75351 MTND5P7-201ENST00000413558 1798 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 RPL9P7-201ENST00000330965 580 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 RNU6-78P-201ENST00000362897 107 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 RNU6-490P-201ENST00000362985 107 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 RNU6-1160P-201ENST00000384546 104 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 RNU6-658P-201ENST00000384606 106 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 RNU6-331P-201ENST00000384724 107 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AL356968.1-201ENST00000416622 474 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AC005326.1-201ENST00000429197 123 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 SNRPEP4-201ENST00000435815 279 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AL035666.1-201ENST00000446195 348 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AL031274.1-201ENST00000450334 232 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 MIR2053-201ENST00000459295 91 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 snoU109.2-201ENST00000459316 135 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 RPL9P9-202ENST00000466501 579 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS4BO75351 AL391261.3-201ENST00000557194 520 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AC109446.1-201ENST00000566172 220 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 MIR4474-201ENST00000579189 78 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AC018889.1-201ENST00000605372 397 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AL355802.3-201ENST00000607571 545 ntBASIC3.33□□□□□ -1.88
VPS4BO75351 AC011890.2-201ENST00000613393 294 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 470 ms