Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RPL7P20-201ENST00000520308 745 ntBASIC2.59□□□□□ -1.99
SSX4O60224 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.59□□□□□ -1.99
SSX4O60224 NRBF2P5-201ENST00000603087 788 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AC006023.1-201ENST00000603944 259 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.59□□□□□ -1.99
SSX4O60224 uc_338.14-201ENST00000613162 166 ntBASIC2.59□□□□□ -1.99
SSX4O60224 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
SSX4O60224 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.59□□□□□ -2
SSX4O60224 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.59□□□□□ -2
SSX4O60224 MAPK10-266ENST00000641066 6555 ntBASIC2.59□□□□□ -2
SSX4O60224 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.58□□□□□ -2
SSX4O60224 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SSX4O60224 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.58□□□□□ -2
SSX4O60224 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.58□□□□□ -2
SSX4O60224 SNORA54-201ENST00000384281 123 ntBASIC2.58□□□□□ -2
SSX4O60224 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.58□□□□□ -2
SSX4O60224 AL513475.1-201ENST00000406602 315 ntBASIC2.58□□□□□ -2
SSX4O60224 SNORD56-201ENST00000413522 71 ntBASIC2.58□□□□□ -2
SSX4O60224 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.58□□□□□ -2
SSX4O60224 Z98742.2-201ENST00000431564 187 ntBASIC2.58□□□□□ -2
SSX4O60224 AL365400.1-201ENST00000431854 640 ntBASIC2.58□□□□□ -2
SSX4O60224 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.58□□□□□ -2
SSX4O60224 HMGN2P26-201ENST00000463169 339 ntBASIC2.58□□□□□ -2
SSX4O60224 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.58□□□□□ -2
SSX4O60224 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
SSX4O60224 Y_RNA.665-201ENST00000516177 98 ntBASIC2.58□□□□□ -2
SSX4O60224 RNU5B-3P-201ENST00000516601 115 ntBASIC2.58□□□□□ -2
SSX4O60224 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
SSX4O60224 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.58□□□□□ -2
SSX4O60224 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.58□□□□□ -2
SSX4O60224 AC138761.3-201ENST00000579993 334 ntBASIC2.58□□□□□ -2
SSX4O60224 OR1M4P-201ENST00000589199 287 ntBASIC2.58□□□□□ -2
SSX4O60224 BNIP3P25-201ENST00000596023 559 ntBASIC2.58□□□□□ -2
SSX4O60224 RNU6-85P-201ENST00000605989 107 ntBASIC2.58□□□□□ -2
SSX4O60224 AL121757.2-201ENST00000611223 313 ntBASIC2.58□□□□□ -2
SSX4O60224 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SSX4O60224 AC002553.4-201ENST00000616896 331 ntBASIC2.58□□□□□ -2
SSX4O60224 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.58□□□□□ -2
SSX4O60224 AC138627.2-201ENST00000624202 601 ntBASIC2.58□□□□□ -2
SSX4O60224 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SSX4O60224 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
SSX4O60224 AC121333.1-201ENST00000567488 2709 ntBASIC2.57□□□□□ -2
SSX4O60224 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
SSX4O60224 RBBP8P1-201ENST00000449447 1844 ntBASIC2.57□□□□□ -2
SSX4O60224 AC138393.1-203ENST00000327086 343 ntBASIC2.57□□□□□ -2
SSX4O60224 Y_RNA.373-201ENST00000365600 103 ntBASIC2.57□□□□□ -2
SSX4O60224 RNU6-373P-201ENST00000411247 98 ntBASIC2.57□□□□□ -2
SSX4O60224 MRPS10P2-201ENST00000431226 381 ntBASIC2.57□□□□□ -2
SSX4O60224 RPS15AP7-201ENST00000439294 405 ntBASIC2.57□□□□□ -2
SSX4O60224 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.57□□□□□ -2
SSX4O60224 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.57□□□□□ -2
SSX4O60224 NFU1P2-201ENST00000448700 469 ntBASIC2.57□□□□□ -2
SSX4O60224 AC012308.1-201ENST00000451232 178 ntBASIC2.57□□□□□ -2
SSX4O60224 AC008571.1-201ENST00000467232 300 ntBASIC2.57□□□□□ -2
SSX4O60224 RPL23AP70-201ENST00000483361 460 ntBASIC2.57□□□□□ -2
SSX4O60224 MTCYBP18-201ENST00000501056 747 ntBASIC2.57□□□□□ -2
SSX4O60224 MTCYBP40-201ENST00000509390 1135 ntBASIC2.57□□□□□ -2
SSX4O60224 SNORA19.2-201ENST00000516013 114 ntBASIC2.57□□□□□ -2
SSX4O60224 RNU6-1069P-201ENST00000516612 133 ntBASIC2.57□□□□□ -2
SSX4O60224 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.57□□□□□ -2
SSX4O60224 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.57□□□□□ -2
SSX4O60224 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.57□□□□□ -2
SSX4O60224 GTF3AP2-201ENST00000557014 266 ntBASIC2.57□□□□□ -2
SSX4O60224 SNORA59B-202ENST00000578183 701 ntBASIC2.57□□□□□ -2
SSX4O60224 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.57□□□□□ -2
SSX4O60224 MIR3529-201ENST00000637713 78 ntBASIC2.57□□□□□ -2
SSX4O60224 U4.7-201ENST00000638126 106 ntBASIC2.57□□□□□ -2
SSX4O60224 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.57□□□□□ -2
SSX4O60224 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.57□□□□□ -2
SSX4O60224 AL109809.4-201ENST00000603520 2185 ntBASIC2.57□□□□□ -2
SSX4O60224 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.56□□□□□ -2
SSX4O60224 Y_RNA.248-201ENST00000364501 109 ntBASIC2.56□□□□□ -2
SSX4O60224 RNU6-843P-201ENST00000384454 104 ntBASIC2.56□□□□□ -2
SSX4O60224 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
SSX4O60224 EIF4E2P1-201ENST00000393781 255 ntBASIC2.56□□□□□ -2
SSX4O60224 FABP5P14-201ENST00000437273 393 ntBASIC2.56□□□□□ -2
SSX4O60224 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSX4O60224 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.56□□□□□ -2
SSX4O60224 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.56□□□□□ -2
SSX4O60224 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.56□□□□□ -2
SSX4O60224 RNU7-138P-201ENST00000459479 64 ntBASIC2.56□□□□□ -2
SSX4O60224 RPL7P43-201ENST00000478876 753 ntBASIC2.56□□□□□ -2
SSX4O60224 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.56□□□□□ -2
SSX4O60224 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
SSX4O60224 RNU6-826P-201ENST00000516827 104 ntBASIC2.56□□□□□ -2
SSX4O60224 COX6CP5-201ENST00000527162 228 ntBASIC2.56□□□□□ -2
SSX4O60224 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.56□□□□□ -2
SSX4O60224 AL133241.1-201ENST00000556832 487 ntBASIC2.56□□□□□ -2
SSX4O60224 AC103810.1-201ENST00000579873 453 ntBASIC2.56□□□□□ -2
SSX4O60224 MIR4765-201ENST00000585007 77 ntBASIC2.56□□□□□ -2
SSX4O60224 MIR5692C1-201ENST00000585309 91 ntBASIC2.56□□□□□ -2
SSX4O60224 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
SSX4O60224 RPL12P50-201ENST00000603116 116 ntBASIC2.56□□□□□ -2
SSX4O60224 AL357078.3-201ENST00000607528 618 ntBASIC2.56□□□□□ -2
SSX4O60224 AL359854.1-201ENST00000614203 1594 ntBASIC2.56□□□□□ -2
SSX4O60224 AC026241.1-201ENST00000517873 2142 ntBASIC2.56□□□□□ -2
SSX4O60224 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SSX4O60224 RNU1-35P-201ENST00000362782 153 ntBASIC2.55□□□□□ -2
SSX4O60224 U3.12-201ENST00000364498 214 ntBASIC2.55□□□□□ -2
SSX4O60224 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms