Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.27□□□□□ -2.21
SGCEO43556 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.27□□□□□ -2.21
SGCEO43556 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.27□□□□□ -2.21
SGCEO43556 RNVU1-2-201ENST00000516326 135 ntBASIC1.27□□□□□ -2.21
SGCEO43556 COPS8P3-201ENST00000526024 482 ntBASIC1.27□□□□□ -2.21
SGCEO43556 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.27□□□□□ -2.21
SGCEO43556 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SGCEO43556 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.27□□□□□ -2.21
SGCEO43556 AC130454.1-201ENST00000622948 401 ntBASIC1.27□□□□□ -2.21
SGCEO43556 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.27□□□□□ -2.21
SGCEO43556 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
SGCEO43556 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SGCEO43556 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SGCEO43556 snoU2_19.1-201ENST00000362361 80 ntBASIC1.26□□□□□ -2.21
SGCEO43556 SNORD3E-201ENST00000362899 217 ntBASIC1.26□□□□□ -2.21
SGCEO43556 MIR10A-201ENST00000385043 110 ntBASIC1.26□□□□□ -2.21
SGCEO43556 PIGPP2-201ENST00000411569 458 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.26□□□□□ -2.21
SGCEO43556 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.26□□□□□ -2.21
SGCEO43556 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SGCEO43556 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.26□□□□□ -2.21
SGCEO43556 AL590556.1-201ENST00000423231 483 ntBASIC1.26□□□□□ -2.21
SGCEO43556 CALM1P1-201ENST00000442082 433 ntBASIC1.26□□□□□ -2.21
SGCEO43556 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.26□□□□□ -2.21
SGCEO43556 AL353752.1-201ENST00000454946 260 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AC104982.1-201ENST00000478775 574 ntBASIC1.26□□□□□ -2.21
SGCEO43556 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.26□□□□□ -2.21
SGCEO43556 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.26□□□□□ -2.21
SGCEO43556 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.26□□□□□ -2.21
SGCEO43556 AC011979.2-201ENST00000527568 352 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.26□□□□□ -2.21
SGCEO43556 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
SGCEO43556 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.26□□□□□ -2.21
SGCEO43556 AC103987.3-201ENST00000582071 292 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AL645939.4-201ENST00000604495 135 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AP001485.1-201ENST00000604799 199 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AP000860.1-201ENST00000605250 559 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AL359547.2-201ENST00000615810 418 ntBASIC1.26□□□□□ -2.21
SGCEO43556 AC107308.1-201ENST00000615897 301 ntBASIC1.26□□□□□ -2.21
SGCEO43556 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SGCEO43556 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.25□□□□□ -2.21
SGCEO43556 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SGCEO43556 Y_RNA.46-201ENST00000362695 102 ntBASIC1.25□□□□□ -2.21
SGCEO43556 RNU1-17P-201ENST00000363022 152 ntBASIC1.25□□□□□ -2.21
SGCEO43556 RNU5E-10P-201ENST00000363506 118 ntBASIC1.25□□□□□ -2.21
SGCEO43556 MIR764-201ENST00000390811 85 ntBASIC1.25□□□□□ -2.21
SGCEO43556 Y_RNA.597-201ENST00000410463 100 ntBASIC1.25□□□□□ -2.21
SGCEO43556 RNU4-22P-201ENST00000411058 166 ntBASIC1.25□□□□□ -2.21
SGCEO43556 RPL30P13-201ENST00000418873 348 ntBASIC1.25□□□□□ -2.21
SGCEO43556 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.25□□□□□ -2.21
SGCEO43556 RPL23AP30-201ENST00000432419 501 ntBASIC1.25□□□□□ -2.21
SGCEO43556 RPS15AP10-201ENST00000432472 382 ntBASIC1.25□□□□□ -2.21
SGCEO43556 AL008629.1-201ENST00000438615 184 ntBASIC1.25□□□□□ -2.21
SGCEO43556 MTCO1P44-201ENST00000441935 243 ntBASIC1.25□□□□□ -2.21
SGCEO43556 RPL30P1-201ENST00000488676 339 ntBASIC1.25□□□□□ -2.21
SGCEO43556 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.25□□□□□ -2.21
SGCEO43556 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.25□□□□□ -2.21
SGCEO43556 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.25□□□□□ -2.21
SGCEO43556 AC002400.1-201ENST00000569310 726 ntBASIC1.25□□□□□ -2.21
SGCEO43556 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.25□□□□□ -2.21
SGCEO43556 MTND3P19-201ENST00000603825 345 ntBASIC1.25□□□□□ -2.21
SGCEO43556 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SGCEO43556 U8.1-201ENST00000362843 134 ntBASIC1.24□□□□□ -2.21
SGCEO43556 RNU6-433P-201ENST00000363216 104 ntBASIC1.24□□□□□ -2.21
SGCEO43556 RNU4-13P-201ENST00000364019 141 ntBASIC1.24□□□□□ -2.21
SGCEO43556 RNA5SP493-201ENST00000364115 91 ntBASIC1.24□□□□□ -2.21
SGCEO43556 RNU6-174P-201ENST00000410406 106 ntBASIC1.24□□□□□ -2.21
SGCEO43556 MTCYBP5-201ENST00000423752 1135 ntBASIC1.24□□□□□ -2.21
SGCEO43556 VN1R108P-201ENST00000431580 830 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.24□□□□□ -2.21
SGCEO43556 MTND3P1-201ENST00000441336 220 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AC245517.4-201ENST00000448601 281 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.24□□□□□ -2.21
SGCEO43556 snoU13.23-201ENST00000458863 104 ntBASIC1.24□□□□□ -2.21
SGCEO43556 RNU6-333P-201ENST00000459117 107 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AC005908.1-201ENST00000468701 347 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.24□□□□□ -2.21
SGCEO43556 AC108210.2-201ENST00000503681 201 ntBASIC1.24□□□□□ -2.21
SGCEO43556 RNU6-991P-201ENST00000516168 107 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.24□□□□□ -2.21
SGCEO43556 MTATP6P15-201ENST00000527233 835 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.24□□□□□ -2.21
SGCEO43556 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.24□□□□□ -2.21
SGCEO43556 AC023813.2-201ENST00000564321 469 ntBASIC1.24□□□□□ -2.21
SGCEO43556 SUB1P3-201ENST00000564581 315 ntBASIC1.24□□□□□ -2.21
SGCEO43556 SUB1P4-201ENST00000566062 339 ntBASIC1.24□□□□□ -2.21
SGCEO43556 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.24□□□□□ -2.21
SGCEO43556 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.24□□□□□ -2.21
SGCEO43556 AC078795.2-201ENST00000602835 1252 ntBASIC1.24□□□□□ -2.21
SGCEO43556 AC112187.2-201ENST00000604345 283 ntBASIC1.24□□□□□ -2.21
SGCEO43556 MIR7843-201ENST00000622274 79 ntBASIC1.24□□□□□ -2.21
SGCEO43556 MIR1248-201ENST00000629190 106 ntBASIC1.24□□□□□ -2.21
SGCEO43556 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SGCEO43556 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
SGCEO43556 SNORD14B-201ENST00000364533 90 ntBASIC1.23□□□□□ -2.21
SGCEO43556 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SGCEO43556 RNU6-439P-201ENST00000384188 106 ntBASIC1.23□□□□□ -2.21
SGCEO43556 BTF3L4P1-201ENST00000413813 468 ntBASIC1.23□□□□□ -2.21
SGCEO43556 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms