Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNU6-553P-201ENST00000364047 96 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 MIR504-201ENST00000385065 83 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 RNU6-387P-201ENST00000411331 105 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 AC074117.2-201ENST00000417130 397 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN3O15551 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN3O15551 MTATP6P16-201ENST00000434543 526 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 AC073614.1-201ENST00000438690 650 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 SNRPFP4-201ENST00000456366 242 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN3O15551 AP001025.1-201ENST00000486139 332 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.05□□□□□ -2.08
CLDN3O15551 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN3O15551 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN3O15551 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN3O15551 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.05□□□□□ -2.08
CLDN3O15551 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 AP000763.2-201ENST00000540641 163 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 BNIP3P6-201ENST00000549284 499 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN3O15551 AC090897.2-201ENST00000581715 130 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 AC108479.2-201ENST00000617314 601 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 AC009159.2-201ENST00000617603 606 ntBASIC2.05□□□□□ -2.08
CLDN3O15551 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN3O15551 U8.3-201ENST00000363321 132 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 RNU6-371P-201ENST00000364283 108 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 RNU6-169P-201ENST00000365336 107 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 RAP1BP3-201ENST00000407180 549 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 RNU2-23P-201ENST00000410545 195 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 RPS3AP3-201ENST00000411933 242 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.04□□□□□ -2.08
CLDN3O15551 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN3O15551 SRIP2-201ENST00000428470 166 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 ZNF702P-202ENST00000434269 1966 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 DNAJC19P4-201ENST00000440115 345 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AL136380.1-201ENST00000447970 162 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AC104058.1-201ENST00000448028 297 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AL137159.1-201ENST00000452808 512 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AL121594.1-201ENST00000475906 575 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AC116337.1-201ENST00000509680 687 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN3O15551 RNU1-86P-201ENST00000516108 154 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 RNU1-107P-201ENST00000516617 154 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.04□□□□□ -2.08
CLDN3O15551 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN3O15551 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 NDUFA5P6-201ENST00000542110 379 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN3O15551 MIR3682-201ENST00000581338 84 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 U6.114-201ENST00000636407 96 ntBASIC2.04□□□□□ -2.08
CLDN3O15551 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CLDN3O15551 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN3O15551 RNU6-1210P-201ENST00000363775 107 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 RNU6-116P-201ENST00000384042 109 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 RNU6-1274P-201ENST00000384557 107 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 Y_RNA.576-201ENST00000384781 102 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 RNA5SP390-201ENST00000410191 113 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 RNU2-32P-201ENST00000411193 191 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN3O15551 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN3O15551 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN3O15551 ISCA1P6-201ENST00000427740 390 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 CALM2P2-201ENST00000428512 440 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN3O15551 AC000111.3-201ENST00000433478 193 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 MTCO3P5-201ENST00000433620 714 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN3O15551 AC006512.1-201ENST00000468816 291 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 RPL30P12-201ENST00000474666 353 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN3O15551 AC104806.1-201ENST00000508720 308 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 AC107393.1-201ENST00000512403 346 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 AP003392.2-201ENST00000527269 208 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 SNRPGP17-201ENST00000603780 214 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 AC090578.1-201ENST00000604955 591 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 AC004908.3-201ENST00000610248 625 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN3O15551 AC007792.1-201ENST00000623023 402 ntBASIC2.03□□□□□ -2.08
CLDN3O15551 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.09
CLDN3O15551 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN3O15551 Y_RNA.40-201ENST00000362645 93 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 MIR518A2-201ENST00000384966 87 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLDN3O15551 AL512604.1-201ENST00000404812 257 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 RNU6-195P-201ENST00000411352 109 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN3O15551 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN3O15551 MTND2P9-201ENST00000422293 931 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC096920.1-201ENST00000423991 241 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN3O15551 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN3O15551 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN3O15551 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN3O15551 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms