Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNU6-1-201ENST00000383898 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-1083P-201ENST00000384022 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-48P-201ENST00000384161 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-36P-201ENST00000384172 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-4P-201ENST00000384205 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-5P-201ENST00000384238 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-3P-201ENST00000384314 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-16P-201ENST00000384385 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-15P-201ENST00000384534 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-2-201ENST00000384627 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-29P-201ENST00000384637 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-9-201ENST00000384776 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-33P-201ENST00000384793 107 ntBASIC2.6□□□□□ -1.99
TO15178 MIR181B1-201ENST00000385240 110 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-332P-201ENST00000391193 108 ntBASIC2.6□□□□□ -1.99
TO15178 EIF4E2P1-201ENST00000393781 255 ntBASIC2.6□□□□□ -1.99
TO15178 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.6□□□□□ -1.99
TO15178 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.6□□□□□ -1.99
TO15178 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.6□□□□□ -1.99
TO15178 HMGB1P31-201ENST00000437242 427 ntBASIC2.6□□□□□ -1.99
TO15178 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.6□□□□□ -1.99
TO15178 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.6□□□□□ -1.99
TO15178 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
TO15178 HMGN2P26-201ENST00000463169 339 ntBASIC2.6□□□□□ -1.99
TO15178 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.6□□□□□ -1.99
TO15178 RNU5F-8P-201ENST00000515941 111 ntBASIC2.6□□□□□ -1.99
TO15178 SCARNA17.1-201ENST00000516211 143 ntBASIC2.6□□□□□ -1.99
TO15178 SCARNA17.2-201ENST00000516334 143 ntBASIC2.6□□□□□ -1.99
TO15178 SNORA43.2-201ENST00000516652 128 ntBASIC2.6□□□□□ -1.99
TO15178 AC109479.2-201ENST00000517842 174 ntBASIC2.6□□□□□ -1.99
TO15178 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TO15178 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.6□□□□□ -1.99
TO15178 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.6□□□□□ -1.99
TO15178 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.6□□□□□ -1.99
TO15178 APOOP1-201ENST00000604695 592 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-6P-201ENST00000606623 107 ntBASIC2.6□□□□□ -1.99
TO15178 SCARNA17.4-201ENST00000614296 143 ntBASIC2.6□□□□□ -1.99
TO15178 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
TO15178 MIR3529-201ENST00000637713 78 ntBASIC2.6□□□□□ -1.99
TO15178 AC092593.1-201ENST00000515413 1815 ntBASIC2.6□□□□□ -1.99
TO15178 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.59□□□□□ -1.99
TO15178 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TO15178 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TO15178 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TO15178 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
TO15178 AC138393.1-203ENST00000327086 343 ntBASIC2.59□□□□□ -1.99
TO15178 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
TO15178 Y_RNA.157-201ENST00000363638 102 ntBASIC2.59□□□□□ -1.99
TO15178 SNORA38-201ENST00000363946 132 ntBASIC2.59□□□□□ -1.99
TO15178 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TO15178 Y_RNA.615-201ENST00000410769 117 ntBASIC2.59□□□□□ -1.99
TO15178 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.59□□□□□ -1.99
TO15178 AL139415.2-201ENST00000431968 163 ntBASIC2.59□□□□□ -1.99
TO15178 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.59□□□□□ -1.99
TO15178 NFU1P2-201ENST00000448700 469 ntBASIC2.59□□□□□ -1.99
TO15178 MED28P2-201ENST00000475771 317 ntBASIC2.59□□□□□ -1.99
TO15178 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.59□□□□□ -1.99
TO15178 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.59□□□□□ -1.99
TO15178 AC097462.2-201ENST00000504623 481 ntBASIC2.59□□□□□ -1.99
TO15178 SNORA19.2-201ENST00000516013 114 ntBASIC2.59□□□□□ -1.99
TO15178 RNU5B-3P-201ENST00000516601 115 ntBASIC2.59□□□□□ -1.99
TO15178 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.59□□□□□ -1.99
TO15178 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.59□□□□□ -1.99
TO15178 RNU6-91P-201ENST00000607774 107 ntBASIC2.59□□□□□ -1.99
TO15178 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.59□□□□□ -1.99
TO15178 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -2
TO15178 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.59□□□□□ -2
TO15178 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
TO15178 HAUS6P2-201ENST00000433254 2404 ntBASIC2.59□□□□□ -2
TO15178 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -2
TO15178 RNU6-78P-201ENST00000362897 107 ntBASIC2.58□□□□□ -2
TO15178 Y_RNA.100-201ENST00000363141 102 ntBASIC2.58□□□□□ -2
TO15178 Y_RNA.167-201ENST00000363735 109 ntBASIC2.58□□□□□ -2
TO15178 U3.12-201ENST00000364498 214 ntBASIC2.58□□□□□ -2
TO15178 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
TO15178 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
TO15178 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
TO15178 Z92545.1-201ENST00000411782 234 ntBASIC2.58□□□□□ -2
TO15178 SNORD56-201ENST00000413522 71 ntBASIC2.58□□□□□ -2
TO15178 AC009161.1-201ENST00000417306 376 ntBASIC2.58□□□□□ -2
TO15178 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.58□□□□□ -2
TO15178 AC004383.1-201ENST00000438135 289 ntBASIC2.58□□□□□ -2
TO15178 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.58□□□□□ -2
TO15178 RNU7-138P-201ENST00000459479 64 ntBASIC2.58□□□□□ -2
TO15178 AC007547.1-201ENST00000462177 490 ntBASIC2.58□□□□□ -2
TO15178 AC087884.1-201ENST00000469738 328 ntBASIC2.58□□□□□ -2
TO15178 RPL23AP45-201ENST00000476406 468 ntBASIC2.58□□□□□ -2
TO15178 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
TO15178 Y_RNA.665-201ENST00000516177 98 ntBASIC2.58□□□□□ -2
TO15178 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
TO15178 RNU6-1069P-201ENST00000516612 133 ntBASIC2.58□□□□□ -2
TO15178 AC087854.1-201ENST00000519706 414 ntBASIC2.58□□□□□ -2
TO15178 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
TO15178 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.58□□□□□ -2
TO15178 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
TO15178 MIR3605-201ENST00000583214 100 ntBASIC2.58□□□□□ -2
TO15178 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
TO15178 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
TO15178 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
TO15178 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms