Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RNU1-98P-201ENST00000458992 160 ntBASIC1.3□□□□□ -2.2
UPK2O00526 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK2O00526 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.3□□□□□ -2.2
UPK2O00526 AC112204.1-201ENST00000502591 103 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AC021146.2-201ENST00000504736 556 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK2O00526 MTCO3P9-201ENST00000506989 781 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK2O00526 AC009646.1-201ENST00000510455 318 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK2O00526 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.3□□□□□ -2.2
UPK2O00526 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK2O00526 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK2O00526 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.3□□□□□ -2.2
UPK2O00526 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK2O00526 AP000811.1-201ENST00000603803 651 ntBASIC1.3□□□□□ -2.2
UPK2O00526 CYP2C61P-201ENST00000604072 290 ntBASIC1.3□□□□□ -2.2
UPK2O00526 MIR502-201ENST00000606349 86 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AL391834.2-201ENST00000609982 546 ntBASIC1.3□□□□□ -2.2
UPK2O00526 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
UPK2O00526 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
UPK2O00526 MIR424-201ENST00000362227 98 ntBASIC1.29□□□□□ -2.2
UPK2O00526 RNU5F-6P-201ENST00000362979 116 ntBASIC1.29□□□□□ -2.2
UPK2O00526 MIR29B2-201ENST00000385055 81 ntBASIC1.29□□□□□ -2.2
UPK2O00526 U8.13-201ENST00000390842 128 ntBASIC1.29□□□□□ -2.2
UPK2O00526 RN7SKP284-201ENST00000411002 343 ntBASIC1.29□□□□□ -2.2
UPK2O00526 C1DP2-201ENST00000418167 426 ntBASIC1.29□□□□□ -2.2
UPK2O00526 RPS15AP10-201ENST00000432472 382 ntBASIC1.29□□□□□ -2.2
UPK2O00526 AL354941.1-201ENST00000438600 464 ntBASIC1.29□□□□□ -2.2
UPK2O00526 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK2O00526 KATNBL1P3-201ENST00000443475 909 ntBASIC1.29□□□□□ -2.2
UPK2O00526 AL590365.1-201ENST00000450788 243 ntBASIC1.29□□□□□ -2.2
UPK2O00526 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK2O00526 AC008834.1-201ENST00000511612 175 ntBASIC1.29□□□□□ -2.2
UPK2O00526 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK2O00526 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK2O00526 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK2O00526 AP005435.4-201ENST00000529514 284 ntBASIC1.29□□□□□ -2.2
UPK2O00526 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK2O00526 AK6P1-201ENST00000540219 478 ntBASIC1.29□□□□□ -2.2
UPK2O00526 AC091489.2-201ENST00000566263 604 ntBASIC1.29□□□□□ -2.2
UPK2O00526 MIR8081-201ENST00000611533 95 ntBASIC1.29□□□□□ -2.2
UPK2O00526 U1.36-201ENST00000620684 176 ntBASIC1.29□□□□□ -2.2
UPK2O00526 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK2O00526 AC097372.5-201ENST00000623665 376 ntBASIC1.29□□□□□ -2.2
UPK2O00526 AL157786.1-207ENST00000627771 695 ntBASIC1.29□□□□□ -2.2
UPK2O00526 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK2O00526 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
UPK2O00526 AC106754.1-201ENST00000562632 1513 ntBASIC1.29□□□□□ -2.2
UPK2O00526 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.28□□□□□ -2.2
UPK2O00526 RNU6-641P-201ENST00000384006 107 ntBASIC1.28□□□□□ -2.2
UPK2O00526 EEF1A1P40-201ENST00000412883 573 ntBASIC1.28□□□□□ -2.2
UPK2O00526 RPL21P90-201ENST00000415692 466 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC000111.3-201ENST00000433478 193 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC087884.1-201ENST00000469738 328 ntBASIC1.28□□□□□ -2.2
UPK2O00526 MTND3P3-201ENST00000505004 126 ntBASIC1.28□□□□□ -2.2
UPK2O00526 MTCYBP40-201ENST00000509390 1135 ntBASIC1.28□□□□□ -2.2
UPK2O00526 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
UPK2O00526 RNU1-41P-201ENST00000516161 162 ntBASIC1.28□□□□□ -2.2
UPK2O00526 RNU1-48P-201ENST00000516400 162 ntBASIC1.28□□□□□ -2.2
UPK2O00526 COPS8P3-201ENST00000526024 482 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK2O00526 AP002453.2-201ENST00000533503 320 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC018630.3-201ENST00000542637 96 ntBASIC1.28□□□□□ -2.2
UPK2O00526 HSBP1P1-201ENST00000555205 166 ntBASIC1.28□□□□□ -2.2
UPK2O00526 MIR5697-201ENST00000578045 78 ntBASIC1.28□□□□□ -2.2
UPK2O00526 MIR4255-201ENST00000579351 72 ntBASIC1.28□□□□□ -2.2
UPK2O00526 WISP1-OT1-201ENST00000602893 642 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC025754.2-201ENST00000606491 432 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AL139286.2-201ENST00000606838 396 ntBASIC1.28□□□□□ -2.2
UPK2O00526 uc_338.5-201ENST00000611839 155 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC026585.1-201ENST00000619582 524 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AL159153.1-201ENST00000619688 317 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC007792.1-201ENST00000623023 402 ntBASIC1.28□□□□□ -2.2
UPK2O00526 AC245060.5-201ENST00000610778 3293 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AC006026.1-201ENST00000444025 1803 ntBASIC1.27□□□□□ -2.21
UPK2O00526 MTND4P23-201ENST00000447723 1363 ntBASIC1.27□□□□□ -2.21
UPK2O00526 RNU6-23P-201ENST00000363283 107 ntBASIC1.27□□□□□ -2.21
UPK2O00526 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UPK2O00526 SNORD115.1-201ENST00000391109 76 ntBASIC1.27□□□□□ -2.21
UPK2O00526 RNA5SP100-201ENST00000410903 110 ntBASIC1.27□□□□□ -2.21
UPK2O00526 RNA5SP59-201ENST00000410922 110 ntBASIC1.27□□□□□ -2.21
UPK2O00526 ELOCP4-201ENST00000420090 333 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK2O00526 AL589872.1-201ENST00000426602 288 ntBASIC1.27□□□□□ -2.21
UPK2O00526 MTND5P2-201ENST00000442927 1142 ntBASIC1.27□□□□□ -2.21
UPK2O00526 RPL39P29-201ENST00000447779 157 ntBASIC1.27□□□□□ -2.21
UPK2O00526 DUXAP8-207ENST00000456786 622 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AC005908.1-201ENST00000468701 347 ntBASIC1.27□□□□□ -2.21
UPK2O00526 RPL30P1-201ENST00000488676 339 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
UPK2O00526 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK2O00526 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK2O00526 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.27□□□□□ -2.21
UPK2O00526 MIR449C-201ENST00000516047 92 ntBASIC1.27□□□□□ -2.21
UPK2O00526 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK2O00526 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.27□□□□□ -2.21
UPK2O00526 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms