Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RNF223E7ERA6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RNF223E7ERA6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 AL590240.1-201ENST00000334118 313 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 RNU6-1010P-201ENST00000362757 107 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 Y_RNA.73-201ENST00000362910 113 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 RN7SKP224-201ENST00000364140 325 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 RNU4-36P-201ENST00000364294 144 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 SNORA51.4-201ENST00000364993 124 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 Y_RNA.344-201ENST00000365381 112 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 AC107626.1-201ENST00000471084 183 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 HSPE1P18-201ENST00000517602 280 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 AC107934.2-201ENST00000518653 310 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 DEFB131E-201ENST00000532329 154 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 AC008033.2-201ENST00000542626 177 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 MIR4270-201ENST00000581799 70 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 MIR4691-201ENST00000583764 85 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 AC007229.1-201ENST00000590455 412 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 MIR7641-1-201ENST00000627518 61 ntBASIC4.38□□□□□ -1.71
RNF223E7ERA6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF223E7ERA6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RNF223E7ERA6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF223E7ERA6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF223E7ERA6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF223E7ERA6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 RNU6-1209P-201ENST00000363655 107 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 SNORA4.2-201ENST00000365313 147 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 UBBP2-201ENST00000376781 231 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 RNA5SP87-201ENST00000384155 118 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 MIR3065-201ENST00000390137 79 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 AL590139.1-201ENST00000416267 400 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 EIF4EP4-201ENST00000424916 578 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 AL161651.1-201ENST00000440882 223 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 RPS26P48-201ENST00000491713 339 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 RNU6-240P-201ENST00000516098 97 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 RNY4P20-201ENST00000516678 93 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 SCARNA15-202ENST00000516881 127 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 AP001781.1-201ENST00000530977 207 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 RPS15AP11-201ENST00000594193 385 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 AC008745.1-201ENST00000604064 271 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 HSPE1P7-201ENST00000604681 321 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF223E7ERA6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
RNF223E7ERA6 AC004944.1-201ENST00000517807 3059 ntBASIC4.37□□□□□ -1.71
RNF223E7ERA6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF223E7ERA6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 AL592437.2-201ENST00000421655 2434 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF223E7ERA6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF223E7ERA6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 GVINP1-202ENST00000531871 7271 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF223E7ERA6 RNY3P2-201ENST00000362918 102 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 RNVU1-6-201ENST00000364688 164 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 RNU6-24P-201ENST00000384440 107 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 SNORD56.6-201ENST00000384569 71 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 RNA5SP354-201ENST00000391247 136 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 AC063976.3-201ENST00000426849 329 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 BX276092.6-201ENST00000430476 250 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 RPS29P10-201ENST00000439197 166 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 BX276092.8-201ENST00000455722 250 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 RN7SL354P-201ENST00000469282 294 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 AC096725.1-201ENST00000514266 313 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms