Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC006512.1-201ENST00000468816 291 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 VPS26AP1-201ENST00000483197 979 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 RNA5SP112-201ENST00000515937 99 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 RNU6-732P-201ENST00000516033 103 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A5A8TX70 AC040926.1-201ENST00000530195 238 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
COL6A5A8TX70 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
COL6A5A8TX70 FGF7P5-201ENST00000441829 291 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 snoU13.9-201ENST00000458927 103 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A5A8TX70 DUXAP1-201ENST00000556632 463 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 AP003973.1-201ENST00000604639 691 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 AC019131.2-201ENST00000609071 870 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
COL6A5A8TX70 MIR196A2-201ENST00000385189 110 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 RNU6-837P-201ENST00000391056 108 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 PNRC2P1-201ENST00000423940 420 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AC091959.1-201ENST00000495857 238 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AC108740.1-201ENST00000498629 225 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A5A8TX70 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AC022447.1-201ENST00000515358 464 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AC090625.1-201ENST00000357130 210 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 RNA5SP327-201ENST00000362494 101 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 RNU4-12P-201ENST00000365233 139 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 RNU2-36P-201ENST00000410361 191 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 RPS24P7-201ENST00000416921 246 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 MTND4P19-201ENST00000446659 478 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 RNU6-420P-201ENST00000458780 107 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 SNORA31.22-201ENST00000517204 135 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 NRON-201ENST00000517270 370 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 MIR3115-201ENST00000577915 68 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AC008088.1-201ENST00000580993 280 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL6A5A8TX70 MIR548AZ-201ENST00000616567 95 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AL590240.4-201ENST00000616908 390 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AL158163.2-201ENST00000619110 700 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AP000943.4-201ENST00000622912 357 ntBASIC-0.05□□□□□ -2.42
COL6A5A8TX70 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A5A8TX70 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 AC104651.1-201ENST00000427559 735 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 CETN4P-201ENST00000432407 469 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 RPS29P15-201ENST00000458329 171 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 RNU6-197P-201ENST00000516680 100 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 FTX_3.1-201ENST00000610451 147 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 RNA5SP192-201ENST00000364404 120 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 RNU6-110P-201ENST00000384508 104 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 MIR518D-201ENST00000385014 87 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 RNU2-21P-201ENST00000410368 188 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 AC096531.1-201ENST00000419107 107 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 AC092423.1-201ENST00000430165 186 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 AC006026.2-201ENST00000457376 180 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 HMGB1P29-201ENST00000505659 499 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL6A5A8TX70 AC017083.3-201ENST00000609955 700 ntBASIC-0.06□□□□□ -2.42
COL6A5A8TX70 RNU5D-1-201ENST00000363299 116 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 RNU6-529P-201ENST00000363383 104 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 SNORD1A-201ENST00000364968 72 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 RNA5SP109-201ENST00000391010 116 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL6A5A8TX70 RNU7-27P-201ENST00000459281 62 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC010631.1-201ENST00000474150 156 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC025627.3-201ENST00000582078 182 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AP001330.4-201ENST00000604350 154 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC010900.2-201ENST00000604508 210 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
COL6A5A8TX70 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 RNA5SP496-201ENST00000391240 109 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC006548.1-201ENST00000427470 102 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 MTCO2P20-201ENST00000437339 673 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC112492.4-201ENST00000456549 352 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 AC114811.1-201ENST00000507207 168 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 SCARNA17-201ENST00000516183 144 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 Z98751.3-201ENST00000604447 521 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 CR381572.1-201ENST00000625098 102 ntBASIC-0.07□□□□□ -2.42
COL6A5A8TX70 RNA5SP240-201ENST00000365355 128 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 U6atac.2-201ENST00000408644 118 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AL049874.1-201ENST00000489560 388 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 RNU6-943P-201ENST00000516960 98 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms