Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC005034.5-201ENST00000604219 466 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AP001836.1-201ENST00000604675 523 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 Z83843.1-201ENST00000604070 3685 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.28-201ENST00000362554 111 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 U3.6-201ENST00000363622 211 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 RNU6-784P-201ENST00000384330 106 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 SNORD116-20-201ENST00000384529 92 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AC096649.2-201ENST00000416186 393 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AC074117.2-201ENST00000417130 397 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AC069285.2-201ENST00000440210 275 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AC007969.2-201ENST00000441891 191 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 U3.44-201ENST00000458938 192 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 HMGN2P13-201ENST00000476476 274 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 RPL23AP49-201ENST00000492925 468 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AC022447.4-201ENST00000504053 364 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AP002404.1-201ENST00000532005 451 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AL356157.2-201ENST00000605122 111 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AP000553.6-201ENST00000641242 118 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.98□□□□□ -1.77
CCDC85CA6NKD9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.31-201ENST00000362574 102 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 SNORA14A-201ENST00000364773 135 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.422-201ENST00000384054 114 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 SNORA70B-201ENST00000384210 135 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 RNU6-843P-201ENST00000384454 104 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 RNU6-692P-201ENST00000384496 107 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 MIR521-1-201ENST00000384902 87 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AL161651.1-201ENST00000440882 223 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC079354.2-201ENST00000453523 154 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 RAC1P2-201ENST00000511164 579 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 RNU6-581P-201ENST00000516214 105 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 ACA59.2-201ENST00000517061 156 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 SNORA31.23-201ENST00000517219 133 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC008011.1-201ENST00000545989 227 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 MIR4273-201ENST00000582824 84 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC005014.2-201ENST00000607795 599 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC009318.2-201ENST00000610917 651 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 AC064801.1-201ENST00000612025 407 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 MIR3529-201ENST00000637713 78 ntBASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC85CA6NKD9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC85CA6NKD9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 SNORD50.1-201ENST00000362987 71 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 SNORA33.2-201ENST00000365413 134 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 RNA5SP424-201ENST00000390988 115 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 MIR1183-201ENST00000408856 89 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 RNU4-47P-201ENST00000410876 114 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AL591043.1-201ENST00000432461 424 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AC243964.1-201ENST00000441814 261 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AC022493.2-201ENST00000506122 481 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 CKS1BP7-201ENST00000522230 235 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AC091152.3-201ENST00000604227 325 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 PART1_1.1-201ENST00000611761 217 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AC005086.4-201ENST00000623065 213 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AC241585.2-209ENST00000638217 143 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 MTND5P9-201ENST00000503854 1755 ntBASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 AC008669.1-201ENST00000565823 2178 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms