Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 MAPK10-349ENST00000641767 3661 ntBASIC4.83□□□□□ -1.64
USP17L4A6NCW7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP17L4A6NCW7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC010733.2-201ENST00000589496 5702 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 RNU6-1280P-201ENST00000365211 107 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 U8.10-201ENST00000384260 133 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 RNU6-378P-201ENST00000384324 107 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 MIR544A-201ENST00000384855 91 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 MIR10B-201ENST00000385011 110 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 HDGFP1-201ENST00000405943 252 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 FTH1P15-201ENST00000406984 280 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC017079.2-201ENST00000416102 485 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC012308.1-201ENST00000451232 178 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 RPL26P9-201ENST00000457466 433 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC073901.1-201ENST00000462471 408 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 PPIAP15-201ENST00000479662 484 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC011602.1-201ENST00000546484 331 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 MIR4643-201ENST00000577473 78 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC087499.8-201ENST00000578406 226 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AL451007.1-201ENST00000595491 289 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 MIR432-201ENST00000606207 94 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC084757.4-201ENST00000616350 526 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AC012314.7-201ENST00000619693 93 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 MIR7702-201ENST00000621931 59 ntBASIC4.82□□□□□ -1.64
USP17L4A6NCW7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP17L4A6NCW7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 MIR411-201ENST00000362239 96 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 RNA5SP97-201ENST00000365006 84 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 RN7SKP61-201ENST00000410642 295 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 AL390729.2-201ENST00000416137 156 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 SNORA25.14-201ENST00000516481 132 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 RNU7-110P-201ENST00000516891 62 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 CBX3P4-201ENST00000538909 354 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 AL161756.2-201ENST00000604597 246 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 AL391261.4-201ENST00000616012 481 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 MAPK10-372ENST00000641954 3413 ntBASIC4.81□□□□□ -1.64
USP17L4A6NCW7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP17L4A6NCW7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 RNU6-1159P-201ENST00000362933 107 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 RNA5SP399-201ENST00000364003 117 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 RNU6-159P-201ENST00000391080 106 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 RPL21P17-201ENST00000397467 475 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 S100A11P1-201ENST00000477525 312 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 RPS4XP22-201ENST00000480755 780 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 RN7SKP289-201ENST00000517244 295 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 AC009163.5-201ENST00000575421 637 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 MIR4423-201ENST00000580922 80 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 MIR3529-201ENST00000637713 78 ntBASIC4.8□□□□□ -1.64
USP17L4A6NCW7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
USP17L4A6NCW7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AC092268.1-201ENST00000342691 405 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 SNORA25.1-201ENST00000362326 128 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 RNU6-514P-201ENST00000384208 107 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 Y_RNA.569-201ENST00000384749 103 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 RNU4-30P-201ENST00000410245 143 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 RNU6-1001P-201ENST00000411265 100 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 WARS2P1-201ENST00000429678 537 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AL392103.1-201ENST00000447000 198 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 RNU7-120P-201ENST00000459334 63 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AC117440.1-201ENST00000474107 571 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 CKS1BP7-201ENST00000522230 235 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AP002392.1-201ENST00000537692 208 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AC021231.3-201ENST00000558497 370 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AL162424.1-201ENST00000602325 221 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms