Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-655P-201ENST00000362858 107 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-843P-201ENST00000384454 104 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 CBX3P9-201ENST00000402326 552 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AL356776.1-201ENST00000406574 447 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC104651.1-201ENST00000427559 735 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 FTH1P12-201ENST00000432137 551 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 MRPL42P4-201ENST00000453267 443 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 BTF3P15-201ENST00000455606 336 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 MED28P2-201ENST00000475771 317 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 BET1P1-201ENST00000482276 359 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-572P-201ENST00000516724 80 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 RN7SKP88-201ENST00000516847 250 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC006518.2-201ENST00000542513 940 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC133485.1-201ENST00000567176 124 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC138907.6-201ENST00000568401 126 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC078795.2-201ENST00000602835 1252 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC112220.2-201ENST00000605513 533 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 7SK.8-201ENST00000612110 250 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 7SK.11-201ENST00000615477 250 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 7SK.13-201ENST00000622040 250 ntBASIC0.41□□□□□ -2.34
TCRBV3S1A0A5B6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.4□□□□□ -2.34
TCRBV3S1A0A5B6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.4□□□□□ -2.34
TCRBV3S1A0A5B6 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 RNU4-27P-201ENST00000410889 139 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AC010099.3-201ENST00000423896 409 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 SNX2P2-201ENST00000424553 323 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 RNU7-136P-201ENST00000458819 69 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 HMGN2P9-201ENST00000476875 229 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 HMGN1P7-201ENST00000491722 313 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 SNRPGP1-201ENST00000553864 222 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AP002906.1-201ENST00000603405 233 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AC130324.3-201ENST00000614165 542 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AL589994.2-201ENST00000621124 579 ntBASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
TCRBV3S1A0A5B6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-288P-201ENST00000363690 104 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RNA5SP99-201ENST00000364020 114 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 MIR520E-201ENST00000384867 87 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 MIR605-201ENST00000385078 83 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RPL21P24-201ENST00000413752 448 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RPS15AP12-201ENST00000419498 388 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RPS27AP8-201ENST00000452665 445 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RNU1-131P-201ENST00000458943 161 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RNA5SP269-201ENST00000459032 137 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AL163540.1-201ENST00000485382 386 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC097473.1-201ENST00000508142 408 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC009646.1-201ENST00000510455 318 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 RNA5SP384-201ENST00000516615 116 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC044913.1-201ENST00000557200 430 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC025678.1-201ENST00000567861 338 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC090330.1-201ENST00000588646 764 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 VN1R83P-201ENST00000595685 445 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC008751.2-201ENST00000597885 980 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC105129.3-201ENST00000605455 485 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC123767.1-202ENST00000620407 817 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 AC068647.2-201ENST00000637380 353 ntBASIC0.39□□□□□ -2.35
TCRBV3S1A0A5B6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 LINC02555-201ENST00000563933 1951 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AL161781.1-201ENST00000354277 403 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 MIR340-201ENST00000362125 95 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-1210P-201ENST00000363775 107 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-622P-201ENST00000384272 103 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-14P-201ENST00000384630 106 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AL031577.2-201ENST00000404133 280 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AL359634.1-202ENST00000404721 284 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 RPS26P5-201ENST00000418544 335 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 MTND4LP7-201ENST00000431728 294 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 MTCYBP15-201ENST00000433123 1127 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms