Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU6-965P-201ENST00000516721 96 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC109329.1-201ENST00000518744 317 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AP003122.4-201ENST00000530980 758 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 MIR4422-201ENST00000581938 83 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AL022154.1-201ENST00000604698 785 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AL139418.1-201ENST00000613613 177 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC021755.4-201ENST00000616620 456 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC006338.1-201ENST00000618453 749 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 MIR3529-201ENST00000637713 78 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 FARSBP1-201ENST00000435808 1778 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 RNU1-58P-201ENST00000362413 163 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 SNORD14B-201ENST00000364533 90 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-487P-201ENST00000365430 104 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-546P-201ENST00000383991 107 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AL031779.1-201ENST00000415663 330 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AP1B1P2-201ENST00000416196 106 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC009518.2-201ENST00000418056 731 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 RPL23AP35-201ENST00000451906 501 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AL353752.1-201ENST00000454946 260 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 RNU1-123P-201ENST00000458950 160 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 HMGB1P30-201ENST00000492455 606 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 PTP4A1P4-201ENST00000512479 322 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC112206.3-201ENST00000514578 389 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-991P-201ENST00000516168 107 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 RNA5SP61-201ENST00000516453 100 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AP004607.1-201ENST00000524456 203 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 COPS8P3-201ENST00000526024 482 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AP005597.4-201ENST00000526762 229 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC078795.2-201ENST00000602835 1252 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AL139022.2-201ENST00000606934 443 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AL157392.4-201ENST00000609756 345 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC024940.5-201ENST00000622889 474 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AP002782.1-201ENST00000623107 614 ntBASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV41A0A0B4J266 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-655P-201ENST00000362858 107 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 Y_RNA.67-201ENST00000362870 100 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 Y_RNA.97-201ENST00000363094 102 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 SNORD26-201ENST00000384147 75 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 MIR122-201ENST00000385044 85 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 RNU1-78P-201ENST00000391248 165 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 BTF3L4P2-201ENST00000392798 346 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 SRIP3-201ENST00000413200 219 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 RPL30P13-201ENST00000418873 348 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 SDAD1P3-201ENST00000427380 333 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 MTCYBP18-201ENST00000501056 747 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-1003P-201ENST00000517099 105 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AC105185.1-201ENST00000518705 535 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 MTATP6P15-201ENST00000527233 835 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AC022616.8-201ENST00000533569 253 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 CR383656.8-201ENST00000549046 145 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AL670379.2-201ENST00000604983 252 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AL670379.4-201ENST00000605279 254 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 RNU4-5P-201ENST00000607255 135 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 AL022345.1-201ENST00000607292 135 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 MIR7974-201ENST00000615835 79 ntBASIC1.04□□□□□ -2.24
TRAV41A0A0B4J266 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 CBX3P1-201ENST00000325243 554 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-960P-201ENST00000364056 120 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-439P-201ENST00000384188 106 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 MIR758-201ENST00000390227 88 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 FGF7P8-201ENST00000402994 292 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL355143.1-201ENST00000407101 841 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 RNU2-23P-201ENST00000410545 195 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 RNU2-62P-201ENST00000410868 191 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL353777.1-201ENST00000425552 326 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC092648.1-201ENST00000425870 423 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 GDI2P2-201ENST00000445131 608 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms