Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 Y_RNA.333-201ENST00000365274 102 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 RNU6-190P-201ENST00000384154 102 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 Y_RNA.472-201ENST00000384322 102 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 MIR10A-201ENST00000385043 110 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 SNORA26.9-201ENST00000391322 122 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 PIGPP2-201ENST00000411569 458 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 ELOCP17-201ENST00000414751 326 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 RPL21P111-201ENST00000418453 477 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 ELOCP9-201ENST00000418624 239 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC139712.2-201ENST00000424302 339 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AL589872.1-201ENST00000426602 288 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AL627311.1-201ENST00000431514 115 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 USP9YP17-201ENST00000444617 696 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC079140.2-201ENST00000506193 142 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC108078.1-201ENST00000508073 725 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC019176.1-201ENST00000518519 225 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 KC877982.1-201ENST00000602313 470 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 BCRP9-201ENST00000605312 388 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AL159153.1-201ENST00000619688 317 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AP000943.4-201ENST00000622912 357 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 AC100821.1-201ENST00000523153 2479 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 MIR412-201ENST00000362142 91 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 RNY3P13-201ENST00000365542 102 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 RNU6-413P-201ENST00000384115 107 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 RNU6-769P-201ENST00000384407 104 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 RSL24D1P4-201ENST00000400938 484 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 MTCYBP5-201ENST00000423752 1135 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 KATNBL1P3-201ENST00000443475 909 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 GDI2P2-201ENST00000445131 608 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AC007327.1-201ENST00000447461 264 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 RNU6-333P-201ENST00000459117 107 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 RPS29P21-201ENST00000496272 170 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 Y_RNA.689-201ENST00000516589 107 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AC087441.2-201ENST00000529141 262 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 MIR544B-201ENST00000582372 78 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AL022154.1-201ENST00000604698 785 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 AP000654.2-201ENST00000605633 586 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 FRG1KP-201ENST00000623592 341 ntBASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
TRAV12-1A0A0B4J245 LINC02555-201ENST00000563933 1951 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 SNORD56.1-201ENST00000362913 68 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 Y_RNA.192-201ENST00000363977 102 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 RNU6-946P-201ENST00000383878 107 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 RNU6-298P-201ENST00000390888 96 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AL357139.1-201ENST00000407792 426 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 TXNL1P1-201ENST00000429528 554 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AL365400.1-201ENST00000431854 640 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 RPL39P29-201ENST00000447779 157 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 NDUFB1P2-201ENST00000449477 176 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 RPL36AP21-201ENST00000490372 323 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC097473.1-201ENST00000508142 408 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC112206.3-201ENST00000514578 389 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 Y_RNA.687-201ENST00000516558 91 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 SNORA43.2-201ENST00000516652 128 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 RNU6-1092P-201ENST00000516955 87 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 RNA5SP490-201ENST00000517141 136 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 MIR3937-201ENST00000580135 106 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC174048.1-201ENST00000603389 144 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 SNORD114-21-201ENST00000606412 72 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AL355802.3-201ENST00000607571 545 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC092140.2-201ENST00000618027 521 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AL121895.2-201ENST00000619558 447 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 AC095038.3-201ENST00000634439 195 ntBASIC0.7□□□□□ -2.3
TRAV12-1A0A0B4J245 OR4G2P-201ENST00000328113 903 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms