Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC073657.2-201ENST00000605661 303 ntBASIC3.66□□□□□ -1.82
COL4A3BPQ9Y5P4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.66□□□□□ -1.82
COL4A3BPQ9Y5P4 AC007792.1-201ENST00000623023 402 ntBASIC3.66□□□□□ -1.82
COL4A3BPQ9Y5P4 AC097372.5-201ENST00000623665 376 ntBASIC3.66□□□□□ -1.82
COL4A3BPQ9Y5P4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.66□□□□□ -1.82
COL4A3BPQ9Y5P4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.66□□□□□ -1.82
COL4A3BPQ9Y5P4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
COL4A3BPQ9Y5P4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL4A3BPQ9Y5P4 RNU1-70P-201ENST00000362618 164 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AL360182.1-201ENST00000397433 468 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AL357075.1-201ENST00000404107 726 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AL133475.1-201ENST00000404414 305 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 RN7SKP220-201ENST00000410611 288 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 MICF-203ENST00000432679 129 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC007969.2-201ENST00000441891 191 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC091179.1-201ENST00000461606 579 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC130509.1-201ENST00000464158 433 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 RN7SL442P-201ENST00000473804 320 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 SNORA74D-201ENST00000516404 141 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU6-566P-201ENST00000516790 107 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 RN7SKP57-201ENST00000517248 293 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC109329.1-201ENST00000518744 317 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 SCOCP1-201ENST00000554676 349 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 UBE2V2P2-201ENST00000587677 504 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AL157817.1-201ENST00000614264 790 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC091953.5-201ENST00000622919 233 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 AC002543.1-201ENST00000299783 1954 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 FAM35CP-201ENST00000554755 2470 ntBASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A3BPQ9Y5P4 MTND4P23-201ENST00000447723 1363 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AC026241.1-201ENST00000517873 2142 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 Y_RNA.301-201ENST00000364990 103 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AC097463.2-201ENST00000421074 142 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AC006028.1-201ENST00000438379 402 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 MTATP6P23-201ENST00000440153 476 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 RPL39P5-202ENST00000512505 151 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU7-30P-201ENST00000516835 62 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 RNA5SP454-201ENST00000517231 127 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AC104027.1-201ENST00000521887 300 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 TRAV32-201ENST00000553993 340 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AL356157.2-201ENST00000605122 111 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 AL008636.1-201ENST00000625038 1018 ntBASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A3BPQ9Y5P4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 Y_RNA.303-201ENST00000364998 94 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 MIR483-201ENST00000385070 76 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AL513475.1-201ENST00000406602 315 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AL030996.1-201ENST00000411430 235 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 CST9LP2-201ENST00000437612 320 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 MTND5P20-201ENST00000448677 143 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AC112771.1-201ENST00000463581 102 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 HMGN1P12-201ENST00000499125 195 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 PHBP14-201ENST00000512887 367 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 MIR3616-201ENST00000584070 92 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AL137843.1-201ENST00000605078 385 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 uc_338.15-201ENST00000615470 191 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AC090617.7-201ENST00000623952 126 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AC073476.4-201ENST00000628409 72 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 MIR7153-201ENST00000637758 57 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 Z75746.1-201ENST00000440243 2080 ntBASIC3.63□□□□□ -1.83
COL4A3BPQ9Y5P4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 RPL9P7-201ENST00000330965 580 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU1-140P-201ENST00000365040 165 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 RNY3P14-201ENST00000384309 102 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms