Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC125238.1-201ENST00000448842 249 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNU7-170P-201ENST00000459303 61 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AL049873.1-201ENST00000480540 376 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 ACA59.1-201ENST00000515966 143 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AC005899.2-201ENST00000584353 90 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AL451007.1-201ENST00000595491 289 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 MTND4LP5-201ENST00000605152 292 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNVU1-4-201ENST00000612985 164 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 RNU4-35P-201ENST00000362588 141 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-78P-201ENST00000362897 107 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.197-201ENST00000364004 102 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.646-201ENST00000410980 101 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 DBIP2-201ENST00000419076 262 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 HMGN2P10-201ENST00000448085 265 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC010099.1-201ENST00000455434 375 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AP001486.1-201ENST00000463339 476 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 RN7SL807P-201ENST00000470923 297 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AL049830.2-201ENST00000480072 201 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 SNORA31.1-201ENST00000515993 133 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 SNORA31.5-201ENST00000516190 133 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.670-201ENST00000516255 105 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC011494.1-201ENST00000596454 237 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC136443.5-201ENST00000603741 370 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC009314.1-201ENST00000603871 304 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 MIR3199-2-201ENST00000636243 86 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 AC010680.1-201ENST00000590024 3590 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 CDC27P3-201ENST00000635418 1910 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 MTND5P19-201ENST00000424872 1794 ntBASIC3.48□□□□□ -1.85
PCDHB1Q9Y5F3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 SNORA38.1-201ENST00000364172 131 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AL513475.1-201ENST00000406602 315 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 USMG5P1-201ENST00000425964 177 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 MTND3P2-201ENST00000438452 342 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AL714022.1-201ENST00000439897 151 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 RBMY2UP-201ENST00000453474 324 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 RNU7-23P-201ENST00000459465 62 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC133134.1-201ENST00000466800 359 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC021146.2-201ENST00000504736 556 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 SNORA43.2-201ENST00000516652 128 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 SNORA70.19-201ENST00000516717 90 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC005476.1-201ENST00000554427 397 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC103996.1-201ENST00000555468 102 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 TGIF1P1-201ENST00000558095 802 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC021739.1-201ENST00000559631 174 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 VN1R107P-201ENST00000601784 209 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC008121.3-201ENST00000618726 433 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 MIR8057-201ENST00000620957 69 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 AC233263.6-201ENST00000631132 1963 ntBASIC3.47□□□□□ -1.85
PCDHB1Q9Y5F3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.46□□□□□ -1.85
PCDHB1Q9Y5F3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PCDHB1Q9Y5F3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms