Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 RNA5SP502-201ENST00000362694 119 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 Y_RNA.319-201ENST00000365138 92 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 Y_RNA.331-201ENST00000365267 102 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 U3.37-201ENST00000408528 213 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 Z92545.1-201ENST00000411782 234 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 SNRPEP9-201ENST00000436794 238 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 RNA5SP309-201ENST00000516670 106 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 RN7SKP49-201ENST00000516675 260 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 TRAV28-201ENST00000557548 323 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 AC020895.1-201ENST00000595362 272 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 MIR7151-201ENST00000617477 60 ntBASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 RNU1-20P-201ENST00000363314 162 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 RNU1-140P-201ENST00000365040 165 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-1117P-201ENST00000384525 104 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 Y_RNA.570-201ENST00000384750 101 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 AL390729.2-201ENST00000416137 156 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 TOMM22P1-201ENST00000418578 312 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 RPL23AP46-201ENST00000438548 490 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 SNORA27.4-201ENST00000516650 95 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 MIR4423-201ENST00000580922 80 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 MIR5195-201ENST00000583555 115 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 AC073349.3-201ENST00000617616 186 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 AC140113.4-201ENST00000622087 222 ntBASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZC3H4Q9UPT8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ZC3H4Q9UPT8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-213P-201ENST00000384051 104 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 Y_RNA.446-201ENST00000384178 104 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 SNORA29-201ENST00000384183 140 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-658P-201ENST00000384606 106 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 MIR195-201ENST00000385194 87 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 RNU2-37P-201ENST00000410695 177 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-394P-201ENST00000410735 107 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 RPL26P26-201ENST00000480251 434 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 AC005828.6-201ENST00000606610 232 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 AC068831.7-201ENST00000616954 363 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 AC068254.2-201ENST00000623938 3577 ntBASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ZC3H4Q9UPT8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 UBE2WP1-201ENST00000362030 340 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-961P-201ENST00000363893 105 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-81P-201ENST00000365608 104 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 SNORD116-18-201ENST00000383961 92 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-142P-201ENST00000384019 107 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 MIR10B-201ENST00000385011 110 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 HLFP1-201ENST00000402375 499 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RPL23AP48-201ENST00000406913 488 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RNA5SP129-201ENST00000410276 118 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 Y_RNA.597-201ENST00000410463 100 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RNA5SP31-201ENST00000411144 127 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RPL23AP36-201ENST00000413895 458 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 AC243964.1-201ENST00000441814 261 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 AL031659.1-201ENST00000447075 539 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 AC009237.7-201ENST00000447357 229 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RPS4XP13-201ENST00000483219 789 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 HMGB1P22-201ENST00000505315 124 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 SNORA70.16-201ENST00000516390 95 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 KLKP1-201ENST00000595979 403 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms