Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 ELOCP29-201ENST00000588193 334 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.27-201ENST00000362540 103 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 snoU2_19.2-201ENST00000363024 80 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 RNU4-44P-201ENST00000363050 141 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 RNU6-97P-201ENST00000363387 104 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AP002088.1-201ENST00000382740 395 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.399-201ENST00000383955 105 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 RNU6-22P-201ENST00000384355 107 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 RNU1-89P-201ENST00000384592 164 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 MIR504-201ENST00000385065 83 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 BX682237.1-201ENST00000415016 335 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 RPL35AP22-201ENST00000436855 335 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AC005094.1-201ENST00000440420 368 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 RNU7-138P-201ENST00000459479 64 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 UBL5P3-201ENST00000475112 231 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AL049830.2-201ENST00000480072 201 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 FCF1P8-201ENST00000510322 597 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AC004584.2-201ENST00000570407 410 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 MIR4643-201ENST00000577473 78 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AC090615.1-201ENST00000577519 154 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 CPDP1-201ENST00000579660 283 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 COX6CP3-201ENST00000580869 223 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 MIR4293-201ENST00000584305 78 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 AC073410.2-201ENST00000603240 332 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 GABPAP-201ENST00000419271 1356 ntBASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
NOTCH3Q9UM47 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 MIR411-201ENST00000362239 96 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RNY1P16-201ENST00000363063 111 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RNU6-188P-201ENST00000364207 107 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RNU6-740P-201ENST00000364734 105 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AL603910.2-201ENST00000407268 136 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 DAP3P1-201ENST00000441522 278 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC098583.1-201ENST00000480875 255 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC108078.2-201ENST00000510750 236 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RN7SKP82-201ENST00000516786 223 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC026333.2-201ENST00000542164 106 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 LSM6P2-201ENST00000552208 177 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 UBL5P2-201ENST00000583788 219 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 Z83818.1-201ENST00000603584 150 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AL355816.1-201ENST00000607951 118 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AL359893.1-201ENST00000447628 1580 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 HSPA8P1-201ENST00000425843 1833 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 SNORA44-201ENST00000384584 132 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RNU6-959P-201ENST00000384671 107 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RNU6-95P-201ENST00000384697 107 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 SNORA16.2-201ENST00000390991 127 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC016769.3-201ENST00000396562 315 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AL139281.1-201ENST00000422120 335 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AL645568.3-201ENST00000433683 316 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 FABP5P13-201ENST00000452144 328 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC074198.2-201ENST00000508153 258 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 NDUFB4P9-201ENST00000511646 388 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RN7SKP209-201ENST00000516888 304 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1092P-201ENST00000516955 87 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 SCARNA20.6-201ENST00000517251 106 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC144568.1-201ENST00000520139 137 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC022559.1-201ENST00000520905 205 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC012119.1-201ENST00000603184 222 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 RNU6-84P-201ENST00000607737 102 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 AC021753.1-201ENST00000635724 168 ntBASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NOTCH3Q9UM47 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms