Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR411-201ENST00000362239 96 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 MIR200A-201ENST00000384875 90 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 MIR1302-8-201ENST00000408342 128 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC078974.1-201ENST00000411597 223 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 SMURF2P1-201ENST00000514992 481 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 SNORA25.11-201ENST00000515935 105 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 RN7SKP88-201ENST00000516847 250 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 MIR4493-201ENST00000584016 73 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC021851.1-201ENST00000608537 1082 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 7SK.8-201ENST00000612110 250 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 7SK.11-201ENST00000615477 250 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 7SK.13-201ENST00000622040 250 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC008993.2-201ENST00000631744 806 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 RNU4-73P-201ENST00000363164 141 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 PTGES3P4-201ENST00000426243 356 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.1□□□□□ -2.39
SCN11AQ9UI33 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN11AQ9UI33 RNA5SP269-201ENST00000459032 137 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 RPL7P43-201ENST00000478876 753 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.1□□□□□ -2.39
SCN11AQ9UI33 AC105758.1-201ENST00000506038 399 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.1□□□□□ -2.39
SCN11AQ9UI33 C1DP5-201ENST00000525775 383 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 AP003066.2-201ENST00000529375 555 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN11AQ9UI33 EIF1P4-201ENST00000572664 335 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 AC016542.1-201ENST00000608259 493 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.1□□□□□ -2.39
SCN11AQ9UI33 RNU6-884P-201ENST00000363889 107 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 AL591034.2-201ENST00000402839 359 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 HMGB1P17-201ENST00000403495 628 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 MTCYBP32-201ENST00000427945 1084 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 Z82210.1-201ENST00000440037 231 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 AC004865.1-201ENST00000442276 1003 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.09□□□□□ -2.39
SCN11AQ9UI33 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.09□□□□□ -2.39
SCN11AQ9UI33 LARP1BP2-201ENST00000486594 519 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 AC018868.1-201ENST00000491307 315 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.09□□□□□ -2.39
SCN11AQ9UI33 AC104465.1-201ENST00000611365 139 ntBASIC0.09□□□□□ -2.39
SCN11AQ9UI33 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.09□□□□□ -2.39
SCN11AQ9UI33 MIR409-201ENST00000362237 79 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 SNORA8.3-201ENST00000384679 139 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AL121578.1-201ENST00000428051 892 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AC098831.1-201ENST00000440661 216 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AC104073.1-201ENST00000451988 151 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
SCN11AQ9UI33 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.09□□□□□ -2.4
SCN11AQ9UI33 SNORA70.22-201ENST00000517160 124 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 IGLVI-20-201ENST00000519296 130 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AC022432.1-201ENST00000595739 310 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AC004775.1-201ENST00000607389 753 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AC240442.1-201ENST00000616055 283 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AL158163.2-201ENST00000619110 700 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AL138713.1-201ENST00000624026 2130 ntBASIC0.09□□□□□ -2.4
SCN11AQ9UI33 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.09□□□□□ -2.4
SCN11AQ9UI33 RNA5SP361-201ENST00000362686 118 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 RNU5A-1-201ENST00000362698 116 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 AC119751.3-201ENST00000399720 670 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 PNRC2P1-201ENST00000423940 420 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.08□□□□□ -2.4
SCN11AQ9UI33 HMGN3P1-201ENST00000453847 193 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 MEMO1P3-201ENST00000459811 302 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 PDCD5P2-201ENST00000507570 312 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 AC022616.8-201ENST00000533569 253 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 RPL30P11-203ENST00000598995 310 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 AC068620.3-201ENST00000602749 560 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 AL713866.2-201ENST00000603579 219 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 RPL21P136-201ENST00000605378 396 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 AL162730.1-201ENST00000605734 292 ntBASIC0.08□□□□□ -2.4
SCN11AQ9UI33 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.08□□□□□ -2.4
SCN11AQ9UI33 MIR302D-201ENST00000362275 68 ntBASIC0.07□□□□□ -2.4
SCN11AQ9UI33 RNU6-439P-201ENST00000384188 106 ntBASIC0.07□□□□□ -2.4
SCN11AQ9UI33 MIR1262-201ENST00000408276 93 ntBASIC0.07□□□□□ -2.4
SCN11AQ9UI33 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.07□□□□□ -2.4
SCN11AQ9UI33 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
SCN11AQ9UI33 AC074344.1-201ENST00000512823 224 ntBASIC0.07□□□□□ -2.4
SCN11AQ9UI33 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.07□□□□□ -2.4
SCN11AQ9UI33 CYCSP27-201ENST00000527643 293 ntBASIC0.07□□□□□ -2.4
SCN11AQ9UI33 AC009237.15-201ENST00000610252 501 ntBASIC0.07□□□□□ -2.4
SCN11AQ9UI33 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.07□□□□□ -2.4
SCN11AQ9UI33 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SCN11AQ9UI33 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 RPL26P27-201ENST00000414397 437 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 CETN4P-201ENST00000432407 469 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.06□□□□□ -2.4
SCN11AQ9UI33 RNU6-488P-201ENST00000515918 99 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.06□□□□□ -2.4
SCN11AQ9UI33 AL512310.8-201ENST00000550183 120 ntBASIC0.06□□□□□ -2.4
SCN11AQ9UI33 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms