Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 MTND1P36-201ENST00000522384 936 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 OR8K2P-201ENST00000524645 927 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AL136520.1-202ENST00000555494 763 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC025678.1-201ENST00000567861 338 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 SNORA77B-201ENST00000578179 125 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC104984.5-201ENST00000586878 94 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AP002802.2-201ENST00000605877 235 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 MIR8063-201ENST00000621930 81 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC130454.1-201ENST00000622948 401 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC008993.2-201ENST00000631744 806 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC233981.2-201ENST00000611524 1614 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 Y_RNA.40-201ENST00000362645 93 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 RNA5SP493-201ENST00000364115 91 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 AC119751.3-201ENST00000399720 670 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 MIR1284-201ENST00000408337 120 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 EEF1E1P1-201ENST00000446998 430 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 ZNF886P-201ENST00000450781 723 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 AC003071.1-201ENST00000451219 789 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 RPL30P7-201ENST00000479312 323 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 HMGB1P30-201ENST00000492455 606 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 RNU6-1315P-201ENST00000517187 99 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 TRAV32-201ENST00000553993 340 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 AC012414.6-201ENST00000568241 401 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 MIR3169-201ENST00000578032 83 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 AP003485.1-201ENST00000625093 753 ntBASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VPS29Q9UBQ0 MIR302D-201ENST00000362275 68 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 RNU6-622P-201ENST00000384272 103 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 SNRPEP10-201ENST00000420249 274 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 USP9YP17-201ENST00000444617 696 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 RPL30P12-201ENST00000474666 353 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 DEFB108A-201ENST00000530110 222 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 MIR4298-201ENST00000584380 73 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 AC005776.1-201ENST00000603164 290 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 AL590240.4-201ENST00000616908 390 ntBASIC1□□□□□ -2.25
VPS29Q9UBQ0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
VPS29Q9UBQ0 ICE2P2-201ENST00000483823 2787 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 Y_RNA.534-201ENST00000384599 112 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 FCF1P10-201ENST00000407590 479 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 RNU2-23P-201ENST00000410545 195 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AL591704.1-201ENST00000432574 275 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 GDI2P2-201ENST00000445131 608 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 HMGN1P13-201ENST00000505795 138 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AL157871.3-201ENST00000557231 293 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AP000860.1-201ENST00000605250 559 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AC006270.3-201ENST00000605967 1036 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AL355802.3-201ENST00000607571 545 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 MIR1248-201ENST00000629190 106 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AC099654.8-201ENST00000637757 681 ntBASIC0.99□□□□□ -2.25
VPS29Q9UBQ0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 RNU6-212P-201ENST00000362642 104 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 SNORD1A-201ENST00000364968 72 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 RNU6-278P-201ENST00000390945 109 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 RPL37P10-201ENST00000412884 288 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AC009518.2-201ENST00000418056 731 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AC139712.2-201ENST00000424302 339 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 MTND2P4-201ENST00000445034 1004 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 MTCO2P25-201ENST00000447065 681 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AL353752.1-201ENST00000454946 260 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 snoU13.14-201ENST00000459372 104 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms