Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORA14A-201ENST00000364773 135 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 RNU6-1280P-201ENST00000365211 107 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 RNU6-1329P-201ENST00000365664 107 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
COL20A1Q9P218 Y_RNA.529-201ENST00000384586 119 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 MIR518D-201ENST00000385014 87 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 RNU6-293P-201ENST00000411259 106 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 SNORD56-201ENST00000413522 71 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 AC022018.1-201ENST00000430685 241 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 AL645568.3-201ENST00000433683 316 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 RPS15AP5-201ENST00000436276 388 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.36□□□□□ -1.87
COL20A1Q9P218 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.36□□□□□ -1.87
COL20A1Q9P218 AC022634.1-201ENST00000520765 532 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 AP005597.4-201ENST00000526762 229 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.36□□□□□ -1.87
COL20A1Q9P218 AL132765.2-201ENST00000610812 351 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
COL20A1Q9P218 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL20A1Q9P218 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL20A1Q9P218 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL20A1Q9P218 RNU1-105P-201ENST00000363470 161 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL20A1Q9P218 AL445529.1-201ENST00000398713 389 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 MIR548K-201ENST00000408406 116 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 AC093151.1-201ENST00000427711 313 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 RPS15AP10-201ENST00000432472 382 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL20A1Q9P218 RPL23AP45-201ENST00000476406 468 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 AC010186.2-204ENST00000537668 439 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 AC079600.2-201ENST00000550076 130 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 AC123912.5-201ENST00000605470 343 ntBASIC3.35□□□□□ -1.87
COL20A1Q9P218 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
COL20A1Q9P218 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
COL20A1Q9P218 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.87
COL20A1Q9P218 Y_RNA.61-201ENST00000362835 102 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 Y_RNA.384-201ENST00000383909 102 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 MTND1P17-201ENST00000448961 204 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 AL031274.1-201ENST00000450334 232 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 Y_RNA.635-201ENST00000459041 101 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 RNU6-1037P-201ENST00000459571 107 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 AC130509.1-201ENST00000464158 433 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 RPS27P27-201ENST00000498779 255 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 AC092436.3-201ENST00000511788 257 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.34□□□□□ -1.87
COL20A1Q9P218 SCGB1D5P-201ENST00000515134 247 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 RNU6-377P-201ENST00000515965 102 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.34□□□□□ -1.87
COL20A1Q9P218 AP005639.2-201ENST00000527592 928 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 ELOCP5-201ENST00000604924 333 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 AL359697.1-201ENST00000624879 587 ntBASIC3.34□□□□□ -1.87
COL20A1Q9P218 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
COL20A1Q9P218 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.33□□□□□ -1.88
COL20A1Q9P218 RNU4-73P-201ENST00000363164 141 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 U3.6-201ENST00000363622 211 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 RNU1-100P-201ENST00000365255 165 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL20A1Q9P218 EI24P2-201ENST00000397776 1076 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 MIR548F5-201ENST00000408421 86 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 RPL7P37-201ENST00000425095 738 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AC124916.1-201ENST00000444020 547 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.33□□□□□ -1.88
COL20A1Q9P218 AC083906.5-201ENST00000503722 328 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 MTND5P5-201ENST00000503764 376 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 SNORD19.2-201ENST00000516978 73 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AC006199.1-201ENST00000548728 219 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AL121821.2-201ENST00000556081 394 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 GTF3AP2-201ENST00000557014 266 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AC025281.1-201ENST00000567026 265 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AC024153.1-201ENST00000603103 365 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AC113139.1-201ENST00000605049 239 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AL359314.1-201ENST00000616913 261 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 MIR1302-1-201ENST00000637932 143 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 AC112487.2-201ENST00000637950 304 ntBASIC3.33□□□□□ -1.88
COL20A1Q9P218 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.33□□□□□ -1.88
COL20A1Q9P218 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
COL20A1Q9P218 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL20A1Q9P218 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC004944.1-201ENST00000517807 3059 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL20A1Q9P218 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 Y_RNA.11-201ENST00000362375 109 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms