Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNA5SP384-201ENST00000516615 116 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC007991.1-201ENST00000522680 631 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 MIR4273-201ENST00000582824 84 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC078899.3-201ENST00000599065 212 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AL355877.2-201ENST00000603670 358 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC090971.5-201ENST00000621102 293 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AL354798.1-201ENST00000622505 329 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC073476.4-201ENST00000628409 72 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC110079.1-202ENST00000635213 138 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 MTND5P19-201ENST00000424872 1794 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC017071.1-201ENST00000564407 2204 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.46□□□□□ -1.85
MKS1Q9NXB0 AL355596.1-201ENST00000565399 3996 ntBASIC3.46□□□□□ -1.85
MKS1Q9NXB0 MIR372-201ENST00000362225 67 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 RNU6-890P-201ENST00000384121 107 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 MIR30B-201ENST00000384850 88 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AL591034.2-201ENST00000402839 359 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 MTCO2P12-201ENST00000427426 682 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AC004383.1-201ENST00000438135 289 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AC026402.1-201ENST00000513642 170 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 MIR2116-201ENST00000517221 80 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AC009812.2-201ENST00000517657 457 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 CKS1BP7-201ENST00000522230 235 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AC005899.2-201ENST00000584353 90 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 CYP2C61P-201ENST00000604072 290 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 AC092608.2-201ENST00000624427 218 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 MTND5P1-201ENST00000445440 1375 ntBASIC3.46□□□□□ -1.86
MKS1Q9NXB0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MKS1Q9NXB0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 SPRR2C-201ENST00000290702 219 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 RNA5SP383-201ENST00000362934 120 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 RNA5SP139-201ENST00000364340 117 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 SNORD42.2-201ENST00000365570 69 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 RNU6-622P-201ENST00000384272 103 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 MIR147B-201ENST00000390185 80 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 RNA5SP390-201ENST00000410191 113 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 AC126124.2-201ENST00000413542 321 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 AC091390.1-201ENST00000433904 331 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 AL441985.1-201ENST00000457727 251 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 Y_RNA.639-201ENST00000458981 102 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 AC093663.1-201ENST00000497190 394 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 GZMAP1-201ENST00000503054 631 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 SMURF2P1-201ENST00000514992 481 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 RNU6-307P-201ENST00000516743 106 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 SNORA31.26-201ENST00000517250 137 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 BNIP3P22-201ENST00000593399 556 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 AL080274.1-201ENST00000605565 220 ntBASIC3.45□□□□□ -1.86
MKS1Q9NXB0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
MKS1Q9NXB0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 Y_RNA.138-201ENST00000363462 102 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 RNU1-140P-201ENST00000365040 165 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 BTF3L4P2-201ENST00000392798 346 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 EIF4EP2-201ENST00000422816 654 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 BX276092.3-201ENST00000424182 230 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 AL031659.1-201ENST00000447075 539 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 FO393415.2-201ENST00000480085 343 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 AC090897.2-201ENST00000581715 130 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 RNU6-91P-201ENST00000607774 107 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MKS1Q9NXB0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.44□□□□□ -1.86
MKS1Q9NXB0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms