Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 BNIP3P26-201ENST00000600827 554 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC092574.1-201ENST00000609771 420 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 MIR8074-201ENST00000615081 81 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC018926.1-201ENST00000616335 435 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 Y_RNA.311-201ENST00000365068 96 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 RNU6-166P-201ENST00000384371 107 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 RNU6-843P-201ENST00000384454 104 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CISHQ9NSE2 RPL21P90-201ENST00000415692 466 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 RAC1P6-201ENST00000423911 575 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AL591704.1-201ENST00000432574 275 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 NEFMP1-201ENST00000443423 1006 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 EEF1E1P1-201ENST00000446998 430 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC245517.4-201ENST00000448601 281 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 ZNF886P-201ENST00000450781 723 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AL121594.1-201ENST00000475906 575 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 MTND1P36-201ENST00000522384 936 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.06□□□□□ -2.24
CISHQ9NSE2 DEFB108A-201ENST00000530110 222 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.06□□□□□ -2.24
CISHQ9NSE2 AL136520.1-202ENST00000555494 763 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.06□□□□□ -2.24
CISHQ9NSE2 VN1R83P-201ENST00000595685 445 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC024060.1-201ENST00000607052 494 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC093648.1-201ENST00000623546 606 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AP003476.1-201ENST00000623984 516 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC092656.1-203ENST00000624134 423 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 AL512643.1-201ENST00000635735 524 ntBASIC1.06□□□□□ -2.24
CISHQ9NSE2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
CISHQ9NSE2 AC233981.2-201ENST00000611524 1614 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 RNU6-655P-201ENST00000362858 107 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 RNU6-560P-201ENST00000364007 108 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 RNU5A-8P-201ENST00000364102 114 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 RNU6-278P-201ENST00000390945 109 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 MIR320C1-201ENST00000408566 88 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.05□□□□□ -2.24
CISHQ9NSE2 TOMM22P2-201ENST00000430735 237 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 MTCO3P5-201ENST00000433620 714 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 MTND4P25-201ENST00000441039 533 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 AC108059.3-201ENST00000456388 214 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 ARL2BPP4-201ENST00000506854 471 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
CISHQ9NSE2 AC008837.2-201ENST00000513076 418 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.05□□□□□ -2.24
CISHQ9NSE2 RNU6-1315P-201ENST00000517187 99 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.05□□□□□ -2.24
CISHQ9NSE2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.05□□□□□ -2.24
CISHQ9NSE2 LRRC6P1-201ENST00000532188 885 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 BNIP3P30-201ENST00000601184 574 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CISHQ9NSE2 AC090517.3-201ENST00000625170 141 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 AL133216.2-202ENST00000634512 349 ntBASIC1.05□□□□□ -2.24
CISHQ9NSE2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CISHQ9NSE2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CISHQ9NSE2 RNU6-701P-201ENST00000384059 107 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 Y_RNA.534-201ENST00000384599 112 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 MIR29B2-201ENST00000385055 81 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.04□□□□□ -2.24
CISHQ9NSE2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.04□□□□□ -2.24
CISHQ9NSE2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.04□□□□□ -2.24
CISHQ9NSE2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.04□□□□□ -2.24
CISHQ9NSE2 MTND1P16-201ENST00000465177 898 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC132942.1-201ENST00000486753 483 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 RNA5SP445-201ENST00000515889 115 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 RNU6-902P-201ENST00000517212 91 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.04□□□□□ -2.24
CISHQ9NSE2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC005668.1-201ENST00000571142 476 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC012065.4-201ENST00000602445 679 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC007363.1-201ENST00000604736 620 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 Z82243.1-201ENST00000609432 473 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC124016.2-201ENST00000610058 665 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC245297.2-201ENST00000610119 565 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AL136313.1-201ENST00000624804 202 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 AC099654.8-201ENST00000637757 681 ntBASIC1.04□□□□□ -2.24
CISHQ9NSE2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CISHQ9NSE2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CISHQ9NSE2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CISHQ9NSE2 RNU6-858P-201ENST00000362436 107 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 RNU6-1210P-201ENST00000363775 107 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.03□□□□□ -2.24
CISHQ9NSE2 CBX3P9-201ENST00000402326 552 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.03□□□□□ -2.24
CISHQ9NSE2 MTCO1P44-201ENST00000441935 243 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AL035666.1-201ENST00000446195 348 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC012308.1-201ENST00000451232 178 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 snoU13.9-201ENST00000458927 103 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 snoU13.14-201ENST00000459372 104 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms