Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC007151.1-201ENST00000572774 483 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 MIR4790-201ENST00000577799 79 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC138761.3-201ENST00000579993 334 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AL356055.1-201ENST00000602528 446 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AL162713.1-201ENST00000604480 262 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 RMST_4.1-201ENST00000616886 107 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC090574.1-201ENST00000623186 233 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 MAPK10-266ENST00000641066 6555 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.67-201ENST00000362870 100 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.135-201ENST00000363439 95 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 RNA5SP126-201ENST00000365092 109 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.339-201ENST00000365325 102 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 RNU2-3P-201ENST00000410144 191 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 CYCSP33-201ENST00000414485 327 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 MTND1P14-201ENST00000427400 950 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.635-201ENST00000459041 101 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 AC008526.1-201ENST00000509149 338 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 AC245166.1-201ENST00000521012 253 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 COPS8P3-201ENST00000526024 482 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 AC010653.1-201ENST00000571108 881 ntBASIC3.31□□□□□ -1.88
VPS45Q9NRW7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.31□□□□□ -1.88
VPS45Q9NRW7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 RNU6-562P-201ENST00000362731 107 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.58-201ENST00000362807 102 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.154-201ENST00000363624 102 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 RNY3P1-201ENST00000365085 102 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 RNY3-201ENST00000365484 102 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 SNORA75B-201ENST00000384053 137 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.490-201ENST00000384413 102 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 RNU6-750P-201ENST00000390946 107 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AL512633.1-201ENST00000399931 655 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 MIR548F5-201ENST00000408421 86 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AC236972.2-201ENST00000434979 310 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AL359672.1-201ENST00000442302 409 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AL078601.1-201ENST00000444542 271 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 RNU7-138P-201ENST00000459479 64 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 MTND4P17-201ENST00000470444 350 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 HMGN1P13-201ENST00000505795 138 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 RNU1-86P-201ENST00000516108 154 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 MIR892C-201ENST00000516410 77 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 RNU1-107P-201ENST00000516617 154 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AP005639.2-201ENST00000527592 928 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 MIR4782-201ENST00000577987 79 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 POLR3GP2-201ENST00000588366 668 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AL645944.1-201ENST00000603857 493 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AL033523.1-201ENST00000605153 153 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 MIR6134-201ENST00000617606 109 ntBASIC3.3□□□□□ -1.88
VPS45Q9NRW7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS45Q9NRW7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 CDC27P3-201ENST00000635418 1910 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.431-201ENST00000384086 102 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 RNU6-214P-201ENST00000384130 107 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 RN7SKP158-201ENST00000410453 326 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 RPL37P10-201ENST00000412884 288 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 MTND1P17-201ENST00000448961 204 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 AC011005.2-201ENST00000487324 359 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 AC139453.3-201ENST00000493276 369 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 MTND5P5-201ENST00000503764 376 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 RNU6-1332P-201ENST00000516666 104 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 AC104984.5-201ENST00000586878 94 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 AL670379.10-201ENST00000604330 253 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms